RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 KBTBD6Q86V97 674 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 AUTS2Q8WXX7 1259 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 Q96MT0 163 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 MAGEH1Q9H213 219 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 SNTG1Q9NSN8 517 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 GMPR2Q9P2T1 348 aaKnown RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 ARHGEF33A8MVX0 844 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 STK16O75716 305 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 FYNP06241 537 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 GLDCP23378 1020 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 RPL10P27635 214 aaKnown RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 FMO3P31513 532 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 LYSMD3Q7Z3D4 306 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 GATA6Q92908 595 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 CNPPD1Q9BV87 410 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 TDRD1Q9BXT4 1180 aaKnown RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 MAGEE1Q9HCI5 957 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 NME7Q9Y5B8 376 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 N6AMT1Q9Y5N5 214 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 GLYATL1P3A0A0U1RQE8 302 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 CLPXO76031 633 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 CHRNA1P02708 482 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 PSKH1P11801 424 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 USP45Q70EL2 814 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 TMCO6Q96DC7 493 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 FEM1CQ96JP0 617 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 AARSD1Q9BTE6 412 aaKnown RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 NSUN3Q9H649 340 aaKnown RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 SUCOQ9UBS9 1254 aaKnown RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 SNX6Q9UNH7 406 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 MAPRE3Q9UPY8 281 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 RREB1Q92766 1687 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 FABP12A6NFH5 140 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC38A8A6NNN8 435 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 FAM25EA8MYX2 175 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 UGT2B11O75310 529 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 PRKACGP22612 351 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 RPIAP49247 311 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 UNC50Q53HI1 259 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 INTS11Q5TA45 600 aaKnown RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 MRPL9Q9BYD2 267 aaKnown RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 TBCCD1Q9NVR7 557 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 A0A1B0GVM2 712 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 TCAF2A6NFQ2 919 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 S1PR4O95977 384 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 YES1P07947 543 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 G6PDP11413 515 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 POU2F1P14859 743 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 GJA1P17302 382 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 ITGA3P26006 1051 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 CPOXP36551 454 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 RXRGP48443 463 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SH3BP2P78314 561 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 DEFA5Q01523 94 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SP3Q02447 781 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 PEX5LQ8IYB4 626 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 RASSF5Q8WWW0 418 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF717Q9BY31 904 aaPredicted RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 DCSTAMPQ9H295 470 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 TFB2MQ9H5Q4 396 aaKnown RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 CFAP97Q9P2B7 532 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 AP3M1Q9Y2T2 418 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 ELOVL7A1L3X0 281 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SH3PXD2BA1X283 911 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 HTRA2O43464 458 aaPredicted RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 PENKP01210 267 aaPredicted RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 IL1BP01584 269 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 PRG2P13727 222 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 HTR7P34969 479 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 MAZP56270 477 aaKnown RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 PIGGQ5H8A4 983 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC7A5P1Q8MH63 180 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 FBXO22Q8NEZ5 403 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 CEP295NLQ96MC4 621 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 TSGA13Q96PP4 275 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 YIPF2Q9BWQ6 316 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 OAS3Q9Y6K5 1087 aaKnown RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 NHSQ6T4R5 1651 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SUV39H1O43463 412 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 DIRAS1O95057 198 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 PORP16435 677 aaPredicted RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 GABRB3P28472 473 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 STC1P52823 247 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SCAPQ12770 1279 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 CHIAQ9BZP6 476 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 COMMD3Q9UBI1 195 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 DNAJC15Q9Y5T4 150 aa12.3□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC22A2O15244 555 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC15A1P46059 708 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CDH4P55283 916 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms