RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 CREG1O75629 220 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 APOA4P06727 396 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 MSL3P1P0C860 447 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 PVRP15151 417 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 MGAT1P26572 445 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 CCR7P32248 378 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 VPS41P49754 854 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 SARNPP82979 210 aaKnown RBP13.98□□□□□ -0.17
CMTM3-215ENST00000568477 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 ERV3-1Q14264 604 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 LRRC8BQ6P9F7 803 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 SPESP1Q6UW49 350 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 SLC22A15Q8IZD6 547 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 OTUD6BQ8N6M0 293 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 LKAAEAR1Q8TD35 194 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 ASZ1Q8WWH4 475 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 CPT1BQ92523 772 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 PBKQ96KB5 322 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 TRAPPC9Q96Q05 1148 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 AP1M1Q9BXS5 423 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 TWSG1Q9GZX9 223 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 KLHL25Q9H0H3 589 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 MRM3Q9HC36 420 aaKnown RBP13.98□□□□□ -0.17
CMTM3-215ENST00000568477 SYBUQ9NX95 663 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 OR6C2Q9NZP2 312 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 TTC7AQ9ULT0 858 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-215ENST00000568477 POLHQ9Y253 713 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 JRKLQ9Y4A0 524 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 SEC16AO15027 2179 aa13.98□□□□□ -0.17
CMTM3-215ENST00000568477 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 CDC14CA4D256 554 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 IQCF5A8MTL0 148 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 TMEM150CB9EJG8 249 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 NDUFS3O75489 264 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 RECKO95980 971 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 RPN2P04844 631 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 KLK3P07288 261 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 CHRM5P08912 532 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 UGT2B7P16662 529 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 CYP2A7P20853 494 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 NMBRP28336 390 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 RPS15P62841 145 aaKnown RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 GPS1Q13098 491 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 GPS2Q13227 327 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 TRIP13Q15645 432 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 PTRHD1Q6GMV3 140 aaKnown RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 FAM199XQ6PEV8 388 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 TRIM73Q86UV7 250 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 LRRC6Q86X45 466 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 RASGEF1CQ8N431 466 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 OR1L3Q8NH93 324 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 C9orf43Q8TAL5 461 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 SEC14L1Q92503 715 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 MR1Q95460 341 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 MAGOHBQ96A72 148 aaKnown RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 LRFN5Q96NI6 719 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 PANX3Q96QZ0 392 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 NAP1L3Q99457 506 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 KIFC1Q9BW19 673 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 GPR87Q9BY21 358 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 ACTL8Q9H568 366 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 AKIRIN1Q9H9L7 192 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-215ENST00000568477 GNPTGQ9UJJ9 305 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 SERTAD3Q9UJW9 196 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 CDC23Q9UJX2 597 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 PLAGL1Q9UM63 463 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 MRFAP1Q9Y605 127 aa13.97□□□□□ -0.17
CMTM3-215ENST00000568477 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 GPC4O75487 556 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 VAPBO95292 243 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 KRT14P02533 472 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 TPBGLP0DKB5 382 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 MAGEA6P43360 314 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 ITGA1P56199 1179 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 NFKB2Q00653 900 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 ABRQ12979 859 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 KCNJ11Q14654 390 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 PRAMEF17Q5VTA0 474 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 PAPD7Q5XG87 772 aaKnown RBP13.96□□□□□ -0.17
CMTM3-215ENST00000568477 MRNIPQ6NTE8 343 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 TTC27Q6P3X3 843 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 UNC5DQ6UXZ4 953 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 SDCCAG8Q86SQ7 713 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-215ENST00000568477 VRK3Q8IV63 474 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 KRT222Q8N1A0 295 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 C19orf47Q8N9M1 422 aaKnown RBP13.96□□□□□ -0.17
CMTM3-215ENST00000568477 CFAP61Q8NHU2 1237 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 GSDMBQ8TAX9 411 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 N4BP2L2Q92802 583 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-215ENST00000568477 CLIP3Q96DZ5 547 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 OR2A14Q96R47 310 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 RUFY1Q96T51 708 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 P2RY12Q9H244 342 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 ACTR5Q9H9F9 607 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-215ENST00000568477 SPHK1Q9NYA1 384 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 SOX13Q9UN79 622 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 CDYLQ9Y232 598 aa13.96□□□□□ -0.17
CMTM3-215ENST00000568477 KCNMB2Q9Y691 235 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms