RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 BABAM2Q9NXR7 383 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 USE1Q9NZ43 259 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 MLXQ9UH92 298 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 TRPS1Q9UHF7 1281 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 DCDC2Q9UHG0 476 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 NARFQ9UHQ1 456 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 MID2Q9UJV3 735 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 TBC1D24Q9ULP9 559 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 OAZ3Q9UMX2 235 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 SCML1Q9UN30 329 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 ABCG2Q9UNQ0 655 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 ERVK-19Q9WJR5 959 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 PCDHGA2Q9Y5H1 932 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 AP1M2Q9Y6Q5 423 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 C5P01031 1676 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 TOPAZ1Q8N9V7 1692 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 SIPA1L1O43166 1804 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 DUOX1Q9NRD9 1551 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 SPATA31A5Q5VU36 1347 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 SPATA31A7Q8IWB4 1347 aa5.71□□□□□ -1.5
CD44-225ENST00000527326 CROCCQ5TZA2 2017 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 A0A075B6Q4 140 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 A0A0G2JPF8 293 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 hCG_1642624A0A1W2PR95 340 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TCRBV5S4A2TA0A5A2 114 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MTMR11A4FU01 709 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TCAF2A6NFQ2 919 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MFSD2BA6NFX1 497 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 GSG1L2A8MUP6 293 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 WASH4PA8MWX3 477 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 KPNA7A9QM74 516 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CHURC1-FNTBB4DL54 471 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 HNRNPCL3B7ZW38 293 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 KPNA3O00505 521 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 NFIBO00712 420 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CYB561D2O14569 222 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PROM1O43490 865 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 AKAP3O75969 853 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SNAPC5O75971 98 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TMEM63AO94886 807 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PROSCO94903 275 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 INMTO95050 263 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 GCNT3O95395 438 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CLIC3O95833 236 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 LDLRP01130 860 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 EPOP01588 193 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TNNC2P02585 160 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CYP17A1P05093 508 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 APOA4P06727 396 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 HTR1AP08908 422 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 FBP1P09467 338 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 USP17L7P0C7H9 530 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 HNRNPCL4P0DMR1 293 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PRG2P13727 222 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 JUPP14923 745 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CHRM3P20309 590 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RAB4AP20338 218 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 EPHA1P21709 976 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RPS3P23396 243 aaKnown RBP eCLIP5.7□□□□□ -1.5
CD44-225ENST00000527326 ACSL1P33121 698 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 BMP8BP34820 402 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SHMT2P34897 504 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RFC2P35250 354 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ADRA1BP35368 520 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MSX2P35548 267 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 SOX6P35712 828 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CAP2P40123 477 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 KCNJ5P48544 419 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 VEGFCP49767 419 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 P2RY4P51582 365 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ALDH3A2P51648 485 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CLCN5P51795 746 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CLCNKAP51800 687 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TKTL1P51854 596 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PRELPP51888 382 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CAPZA1P52907 286 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ATP12AP54707 1039 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ARPP19P56211 112 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 FOXO4P98177 505 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MYL7Q01449 175 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SCN1BQ07699 218 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PPP3CAQ08209 521 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CHAF1BQ13112 559 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MTM1Q13496 603 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 COTL1Q14019 142 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PCLAFQ15004 111 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TOMM20Q15388 145 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CALCRLQ16602 461 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 AOC3Q16853 763 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 DPY19L1Q2PZI1 675 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 AP5B1Q2VPB7 878 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 FAM214AQ32MH5 1076 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SUPT20HL1Q3ZLR7 823 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SLC9B1Q4ZJI4 515 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PABPC1L2AQ5JQF8 200 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PITRM1Q5JRX3 1037 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TCTE1Q5JU00 501 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 FNBP1LQ5T0N5 605 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms