RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 HS3ST3A1Q9Y663 406 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 COL27A1Q8IZC6 1860 aaPredicted RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 KMT2BQ9UMN6 2715 aaPredicted RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 SCN1AP35498 2009 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 NUP205Q92621 2012 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 IGLV3-10A0A075B6K4 115 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 NKX2-8O15522 239 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 PPFIA2O75334 1257 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 KCNK5O95279 499 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TMEM191BP0C7N4 346 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 UBE2HP62256 183 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 THOC5Q13769 683 aaKnown RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 COL28A1Q2UY09 1125 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 SLC39A12Q504Y0 691 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 BRMS1LQ5PSV4 323 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 WSCD1Q658N2 575 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 RBM43Q6ZSC3 357 aaKnown RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 LPCAT2Q7L5N7 544 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 BHLHA9Q7RTU4 235 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 FAM124AQ86V42 546 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 FAM109AQ8N4B1 249 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 ATAD1Q8NBU5 361 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 KLHL29Q96CT2 875 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 CMTM3Q96MX0 182 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 LRRC3BQ96PB8 259 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TREX2Q9BQ50 279 aaPredicted RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 GKN1Q9NS71 199 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 C2orf42Q9NWW7 574 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 USP34Q70CQ2 3546 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TRGV11A0A075B6L2 103 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 C17orf100A8MU93 164 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TAF4O00268 1085 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 MED7O43513 233 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TSPAN3O60637 253 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 PMPCBO75439 489 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 INHBBP09529 407 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 CASQ1P31415 396 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 AVPR1AP37288 418 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 PPP2CBP62714 309 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TNNC1P63316 161 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 PPP2CAP67775 309 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 FKBP3Q00688 224 aaKnown RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 SPAG1Q07617 926 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 BFSP1Q12934 665 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 KCNJ12Q14500 433 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 CEP57L1Q8IYX8 460 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TMEM132CQ8N3T6 1108 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 TTC9BQ8N6N2 239 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 OR6C4Q8NGE1 309 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 RAB7BQ96AH8 199 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 DCLRE1CQ96SD1 692 aaKnown RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 EDEM2Q9BV94 578 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 BEX4Q9NWD9 120 aaPredicted RBP4.94□□□□□ -1.62
NEK1-204ENST00000509912 COQ3Q9NZJ6 369 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 PPP4R1LQ9P1A2 415 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 C5AR2Q9P296 337 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 MGAT4CQ9UBM8 478 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 ADAM18Q9Y3Q7 739 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 JRKLQ9Y4A0 524 aa4.94□□□□□ -1.62
NEK1-204ENST00000509912 THADAQ6YHU6 1953 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 LRRIQ3A6PVS8 624 aaPredicted RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 PP2D1A8MPX8 630 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 PPEF2O14830 753 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 FLRT2O43155 660 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 LIASO43766 372 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 NOBOXO60393 691 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 EGFP01133 1207 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 ATP5C1P36542 298 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 TNFSF9P41273 254 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 VAMP7P51809 220 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 CLNS1AP54105 237 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 CDH8P55286 799 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 TMPRSS3P57727 454 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 GABPB1Q06547 395 aaPredicted RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 TBL3Q12788 808 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 NR1D2Q14995 579 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 CCDC6Q16204 474 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 ZNF766Q5HY98 468 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 TRIM72Q6ZMU5 477 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 STRADAQ7RTN6 431 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 CSGALNACT2Q8N6G5 542 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 LMO3Q8TAP4 145 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 MYLPFQ96A32 169 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 MIEF2Q96C03 454 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 SDCCAG3Q96C92 435 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 VPS50Q96JG6 964 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 FAR2Q96K12 515 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 NUP58Q9BVL2 599 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 MAK16Q9BXY0 300 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 AMACRQ9UHK6 382 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 TMEM5Q9Y2B1 443 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 MFHAS1Q9Y4C4 1052 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 SNX8Q9Y5X2 465 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 CLIC4Q9Y696 253 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 TCAF2A6NFQ2 919 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 C16orf96A6NNT2 1141 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 LATO43561 262 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 SPDEFO95238 335 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 CAVIN2O95810 425 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms