RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 CLPXO76031 633 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 SMPD1P17405 629 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 TUBA4AP68366 448 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 PPP2R2BQ00005 443 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 GANABQ14697 944 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 PTPRCAPQ14761 206 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 TEAD4Q15561 434 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 CCDC157Q569K6 752 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 VARS2Q5ST30 1063 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 MED27Q6P2C8 311 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 SLC24A5Q71RS6 500 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 ZNF655Q8N720 491 aaPredicted RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 FAM98AQ8NCA5 519 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 FCGR1BQ92637 280 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 TMEM203Q969S6 136 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 KCNC2Q96PR1 638 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 TRNT1Q96Q11 434 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 AIF1LQ9BQI0 150 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 GSDMCQ9BYG8 508 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 POLR2J3Q9H1A7 115 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 THG1LQ9NWX6 298 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 ZNF224Q9NZL3 707 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 PHF11Q9UIL8 331 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 RUVBL1Q9Y265 456 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 MRPS23Q9Y3D9 190 aaKnown RBP7.57□□□□□ -1.2
COL21A1-203ENST00000370819 PCDHGB3Q9Y5G1 929 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 PCDHGA10Q9Y5H3 936 aa7.57□□□□□ -1.2
COL21A1-203ENST00000370819 AFDNP55196 1824 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 CITO14578 2027 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 FAM25EA8MYX2 175 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SLC9A3R1O14745 358 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 S100A9P06702 114 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 G6PDP11413 515 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 RPL17P18621 184 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 GNAZP19086 355 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 RYKP34925 604 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 CDH4P55283 916 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 GMFBP60983 142 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PITX1P78337 314 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SMARCB1Q12824 385 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 E2F2Q14209 437 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 KCNA10Q16322 511 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 MOGQ16653 247 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 MYLK3Q32MK0 819 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PLEKHG6Q3KR16 790 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SIRPB2Q5JXA9 342 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 OR4F3Q6IEY1 312 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 OR2T5Q6IEZ7 315 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SLC22A16Q86VW1 577 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 CENPSQ8N2Z9 138 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 OR10G2Q8NGC3 310 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 OR2T29Q8NH02 315 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 FBXO27Q8NI29 283 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PIK3R3Q92569 461 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 MUS81Q96NY9 551 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 FERD3LQ96RJ6 166 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 S100A13Q99584 98 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PTPN18Q99952 460 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 TTYH1Q9H313 450 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 MFSD1Q9H3U5 465 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 ANKRA2Q9H9E1 313 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 NFKBIL1Q9UBC1 381 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 DPP7Q9UHL4 492 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PTBP2Q9UKA9 531 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PCDHGA11Q9Y5H2 935 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PEAK1Q9H792 1746 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 TRPM3Q9HCF6 1732 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 COL1A1P02452 1464 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SDHDO14521 159 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 USP2O75604 605 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 INMTO95050 263 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SNAP29O95721 258 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 PRKAR2AP13861 404 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 ANXA8P13928 327 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SCNN1AP37088 669 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SKP1P63208 163 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 ARF5P84085 180 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 TAF1AQ15573 450 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SF1Q15637 639 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SPANXN4Q5MJ08 99 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 FBXL22Q6P050 247 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 MSANTD2Q6P1R3 559 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 USP50Q70EL3 339 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 LGI4Q8N135 537 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 FIBCD1Q8N539 461 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 ZMIZ2Q8NF64 920 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 C1QTNF7Q9BXJ2 289 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 RNF208Q9H0X6 261 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 TRIT1Q9H3H1 467 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 RPF2Q9H7B2 306 aaKnown RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 IKZF2Q9UKS7 526 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 CFL2Q9Y281 166 aa7.56□□□□□ -1.2
COL21A1-203ENST00000370819 SPIN1Q9Y657 262 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
COL21A1-203ENST00000370819 LOC100130705A0A1B0GUX0 176 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms