RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 H0Y626 953 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 LRATO95237 230 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 TRIM16O95361 564 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 UGT2B4P06133 528 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 ALPIP09923 528 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 ITIH1P19827 911 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 CDKN2CP42773 168 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 MASP1P48740 699 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 TTPAP49638 278 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 VARS2Q5ST30 1063 aaKnown RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 USP50Q70EL3 339 aaPredicted RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 SERINC5Q86VE9 423 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 OR5K1Q8NHB7 308 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 RORBQ92753 470 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 PSKH2Q96QS6 385 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 DCAF13Q9NV06 445 aaKnown RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 C3orf18Q9UK00 162 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 INTS6Q9UL03 887 aaKnown RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 ZNF490Q9ULM2 529 aaPredicted RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 ABCG2Q9UNQ0 655 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 ANGPTL3Q9Y5C1 460 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 PCDHB5Q9Y5E4 795 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 PCDHGA10Q9Y5H3 936 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 PRSS21Q9Y6M0 314 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 hCG_2039718K7EN88 272 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 MAGP20916 626 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 GSSP48637 474 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 CLK3P49761 638 aaKnown RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 SEMG2Q02383 582 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 SLC14A1Q13336 389 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 GBX1Q14549 363 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 CTXN3Q4LDR2 81 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 SPRYD7Q5W111 196 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 FAM151BQ6UXP7 276 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 ZNF551Q7Z340 670 aaPredicted RBP13.74□□□□□ -0.21
USH1C-201ENST00000005226 ADCK1Q86TW2 530 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 ADHFE1Q8IWW8 467 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 C8orf48Q96LL4 319 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 CCDC115Q96NT0 180 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 USE1Q9NZ43 259 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 NUDT4Q9NZJ9 180 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 LOC730098B7Z3J9 87 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 KDM1AO60341 852 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 MT-ND2P03891 347 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 HOXD12P35452 270 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 MAPKAPK2P49137 400 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 NEK2P51955 445 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 GABARAPL2P60520 117 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 RPS3AP61247 264 aaKnown RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 TWF1Q12792 350 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 DSC3Q14574 896 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 UTS2BQ765I0 119 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 ZCCHC7Q8N3Z6 543 aaKnown RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 SVOPLQ8N434 492 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 MFSD4AQ8N468 514 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 KCNJ9Q92806 393 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 FAM120BQ96EK7 910 aaKnown RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 MIR1-1HGQ9H1L0 117 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 KAT8Q9H7Z6 458 aaKnown RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 RIMKLBQ9ULI2 386 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 PKP3Q9Y446 797 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 PER2O15055 1255 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 OTCP00480 354 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 MSH3P20585 1137 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 IGFBP5P24593 272 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
USH1C-201ENST00000005226 CPSF6Q16630 551 aaKnown RBP eCLIP13.73□□□□□ -0.21
USH1C-201ENST00000005226 PTRHD1Q6GMV3 140 aaKnown RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 RSPO2Q6UXX9 243 aaPredicted RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 PPP3R2Q96LZ3 170 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 TSSK3Q96PN8 268 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 TLR8Q9NR97 1041 aaKnown RBP13.73□□□□□ -0.21
USH1C-201ENST00000005226 GKN1Q9NS71 199 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 ATAD3AQ9NVI7 634 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 GIN1Q9NXP7 522 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 DLGAP4Q9Y2H0 992 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 WDR37Q9Y2I8 494 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 SLC45A1Q9Y2W3 748 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 PCDHB9Q9Y5E1 797 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 GBF1Q92538 1859 aa13.73□□□□□ -0.21
USH1C-201ENST00000005226 DYTNA2CJ06 578 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 HTR3EA5X5Y0 456 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 CNOT3O75175 753 aaKnown RBP13.72□□□□□ -0.21
USH1C-201ENST00000005226 SCELO95171 688 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 GJB5O95377 273 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 IGLV3-27P01718 113 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 CR2P20023 1033 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 TACR1P25103 407 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 DAPP51397 102 aa13.72□□□□□ -0.21
USH1C-201ENST00000005226 SLC13A2Q13183 592 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms