RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SLC25A18Q9H1K4 315 aa24.46■■□□□ 1.51
VEGFA-232ENST00000640653 XKR8Q9H6D3 395 aa24.46■■□□□ 1.51
VEGFA-232ENST00000640653 SYTL2Q9HCH5 934 aa24.46■■□□□ 1.51
VEGFA-232ENST00000640653 LATS2Q9NRM7 1088 aa24.46■■□□□ 1.51
VEGFA-232ENST00000640653 TUBD1Q9UJT1 453 aa24.46■■□□□ 1.51
VEGFA-232ENST00000640653 PCDHGA6Q9Y5G7 932 aa24.46■■□□□ 1.51
VEGFA-232ENST00000640653 C21orf140B9A014 251 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 TERTO14746 1132 aaKnown RBP24.45■■□□□ 1.5
VEGFA-232ENST00000640653 KDM1AO60341 852 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 KATNA1O75449 491 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 SCRG1O75711 98 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 NTRK1P04629 796 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 SHMT2P34897 504 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 TTPAP49638 278 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 CDK16Q00536 496 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 KCNAB2Q13303 367 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 DNASE1L3Q13609 305 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 DEFB109BQ30KR1 87 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 NAPRTQ6XQN6 538 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 ADGRF3Q8IZF5 1079 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 PITPNM3Q9BZ71 974 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 ACTR10Q9NZ32 417 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 ICKQ9UPZ9 632 aa24.45■■□□□ 1.5
VEGFA-232ENST00000640653 J3QKU1 62 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 SLC28A2O43868 658 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 TPSB2P20231 275 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 SEMA3AQ14563 771 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 TPSAB1Q15661 275 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 HOOK3Q86VS8 718 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 PRELID2Q8N945 189 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 OR5K2Q8NHB8 316 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 CT55Q8WUE5 264 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 APOBEC4Q8WW27 367 aaKnown RBP24.44■■□□□ 1.5
VEGFA-232ENST00000640653 CARD6Q9BX69 1037 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 JRKLQ9Y4A0 524 aa24.44■■□□□ 1.5
VEGFA-232ENST00000640653 BHMG1C9JSJ3 638 aaPredicted RBP24.43■■□□□ 1.5
VEGFA-232ENST00000640653 CD3EAPO15446 510 aaKnown RBP24.43■■□□□ 1.5
VEGFA-232ENST00000640653 MSL3P1P0C860 447 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 ST6GAL1P15907 406 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 CRADDP78560 199 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 ATP1A1-AS1Q5TC04 95 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 LRRC8BQ6P9F7 803 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 PRICKLE2Q7Z3G6 844 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 ASZ1Q8WWH4 475 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 NRTNQ99748 197 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 TREX1Q9NSU2 369 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 TDRKHQ9Y2W6 561 aaKnown RBP24.43■■□□□ 1.5
VEGFA-232ENST00000640653 COL6A6A6NMZ7 2263 aa24.43■■□□□ 1.5
VEGFA-232ENST00000640653 PIPSLA2A3N6 862 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 PRMT5O14744 637 aaPredicted RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 CREG1O75629 220 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 CCR7P32248 378 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 CSE1LP55060 971 aaKnown RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 SARNPP82979 210 aaKnown RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 ERV3-1Q14264 604 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 DNAJC21Q5F1R6 531 aaKnown RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 SPESP1Q6UW49 350 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 MPP5Q8N3R9 675 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 CPT1BQ92523 772 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 PBKQ96KB5 322 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 TRAPPC9Q96Q05 1148 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 GPR87Q9BY21 358 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 MRM3Q9HC36 420 aaKnown RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 OR6C2Q9NZP2 312 aa24.42■■□□□ 1.5
VEGFA-232ENST00000640653 MARCH4Q9P2E8 410 aaPredicted RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 TTC7AQ9ULT0 858 aaPredicted RBP24.42■■□□□ 1.5
VEGFA-232ENST00000640653 PIKFYVEQ9Y2I7 2098 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 TMEM150CB9EJG8 249 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 RECKO95980 971 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 APOA4P06727 396 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 MGAT1P26572 445 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 NMBRP28336 390 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 HSPA14Q0VDF9 509 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 UNC5AQ6ZN44 842 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 LDB1Q86U70 411 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-232ENST00000640653 SLC22A15Q8IZD6 547 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 SEC14L1Q92503 715 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 LRFN5Q96NI6 719 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 AP1M1Q9BXS5 423 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 GNPTGQ9UJJ9 305 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 POLHQ9Y253 713 aa24.41■■□□□ 1.5
VEGFA-232ENST00000640653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-232ENST00000640653 RPN2P04844 631 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 KLK3P07288 261 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-232ENST00000640653 RPS15P62841 145 aaKnown RBP24.4■■□□□ 1.5
VEGFA-232ENST00000640653 TMED2Q15363 201 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 TRIP13Q15645 432 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-232ENST00000640653 PTRHD1Q6GMV3 140 aaKnown RBP24.4■■□□□ 1.5
VEGFA-232ENST00000640653 LRRC6Q86X45 466 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 RASGEF1CQ8N431 466 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 OTUD6BQ8N6M0 293 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 MR1Q95460 341 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 PANX3Q96QZ0 392 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 NAP1L3Q99457 506 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-232ENST00000640653 KIFC1Q9BW19 673 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 TWSG1Q9GZX9 223 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 ACTL8Q9H568 366 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 SYBUQ9NX95 663 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 SERTAD3Q9UJW9 196 aa24.4■■□□□ 1.5
VEGFA-232ENST00000640653 CFAP46Q8IYW2 2715 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms