RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ARHGAP9Q9BRR9 750 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 ASPSCR1Q9BZE9 553 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 MVB12BQ9H7P6 319 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 APMAPQ9HDC9 416 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 HRASLS2Q9NWW9 162 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 GNPTGQ9UJJ9 305 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 ASF1AQ9Y294 204 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 RPS6KL1Q9Y6S9 549 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 FAM237BA0A1B0GVD1 139 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 GSAPA4D1B5 854 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 TLCD2A6NGC4 264 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 TERTO14746 1132 aaKnown RBP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 POLR2CP19387 275 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 OGNP20774 298 aaKnown RBP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 CCR7P32248 378 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 PAFAH1B1P43034 410 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 PTGIRP43119 386 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 MAGEA3P43357 314 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 SH3BP2P78314 561 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 DR1Q01658 176 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 PLOD1Q02809 727 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 HSPA14Q0VDF9 509 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 PRKAA1Q13131 559 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 PRKG2Q13237 762 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 TMED2Q15363 201 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 TYSND1Q2T9J0 566 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 RNF187Q5TA31 235 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 ZNF470Q6ECI4 717 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 CEACAM20Q6UY09 585 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 VASH2Q86V25 355 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 AGGF1Q8N302 714 aaeCLIP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 OR5AR1Q8NGP9 310 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 RUNDC3BQ96NL0 473 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 TEFMQ96QE5 360 aaKnown RBP15.54■□□□□ 0.08
BRCA1-228ENST00000618469 CD180Q99467 661 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 NRTNQ99748 197 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 MAP3K3Q99759 626 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 P2RY12Q9H244 342 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 SRMSQ9H3Y6 488 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 PCDHB11Q9Y5F2 797 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 AHCTF1Q8WYP5 2266 aa15.54■□□□□ 0.08
BRCA1-228ENST00000618469 IGHV5-51A0A0C4DH38 117 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-228ENST00000618469 BHMG1C9JSJ3 638 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-228ENST00000618469 CCDC188H7C350 402 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 POLR1CO15160 346 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-228ENST00000618469 PFDN6O15212 129 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 APOA4P06727 396 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 RPS3P23396 243 aaKnown RBP eCLIP15.53■□□□□ 0.08
BRCA1-228ENST00000618469 ANKRD20A4Q4UJ75 823 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 CTSL3PQ5NE16 218 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 SDCCAG8Q86SQ7 713 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-228ENST00000618469 LRRC6Q86X45 466 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 DTX1Q86Y01 620 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 VRK3Q8IV63 474 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 SLC22A15Q8IZD6 547 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 KLHL6Q8WZ60 621 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 UBXN4Q92575 508 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 LPGAT1Q92604 370 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 RNF31Q96EP0 1072 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 STAMBPL1Q96FJ0 436 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 PANX3Q96QZ0 392 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 OR6C1Q96RD1 312 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 TRIM51Q9BSJ1 452 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 CARD6Q9BX69 1037 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 TRIT1Q9H3H1 467 aaKnown RBP15.53■□□□□ 0.08
BRCA1-228ENST00000618469 XKR8Q9H6D3 395 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 FBXO8Q9NRD0 319 aa15.53■□□□□ 0.08
BRCA1-228ENST00000618469 BTN3A1O00481 513 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 BANF1O75531 89 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 USP1O94782 785 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 F7P08709 466 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 NELFEP18615 380 aaKnown RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ACADLP28330 430 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ARL4DP49703 201 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ATP1A2P50993 1020 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 KPNA2P52292 529 aaKnown RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 CYP4F2P78329 520 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 THOC5Q13769 683 aaKnown RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 MANEAQ5SRI9 462 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 NEPROQ6NW34 567 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ATG14Q6ZNE5 492 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 SYDE1Q6ZW31 735 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 PCGF5Q86SE9 256 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 HOOK3Q86VS8 718 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 CILP2Q8IUL8 1156 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 SIDT2Q8NBJ9 832 aaKnown RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 OR5K2Q8NHB8 316 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ASZ1Q8WWH4 475 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ELMO2Q96JJ3 720 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 PPM1MQ96MI6 270 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ZPBPQ9BS86 351 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 TFB2MQ9H5Q4 396 aaKnown RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 KCND1Q9NSA2 647 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 POMT2Q9UKY4 750 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ICKQ9UPZ9 632 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 CDYLQ9Y232 598 aa15.52■□□□□ 0.08
BRCA1-228ENST00000618469 TDRKHQ9Y2W6 561 aaKnown RBP15.52■□□□□ 0.08
BRCA1-228ENST00000618469 ZCWPW2A0A1B0GU75 182 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms