RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 SNX12Q9UMY4 172 aa16.43■□□□□ 0.22
HOXD8-204ENST00000544999 NEU2Q9Y3R4 380 aa16.43■□□□□ 0.22
HOXD8-204ENST00000544999 RPS6KL1Q9Y6S9 549 aa16.43■□□□□ 0.22
HOXD8-204ENST00000544999 GOLGA6L10A0A0M3HER8 536 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 C2orf74A8MZ97 194 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 PHF2O75151 1096 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 GPC4O75487 556 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 TIAF1O95411 115 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 MLNP12872 115 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 RPS3P23396 243 aaKnown RBP eCLIP16.42■□□□□ 0.22
HOXD8-204ENST00000544999 PRDX3P30048 256 aaKnown RBP16.42■□□□□ 0.22
HOXD8-204ENST00000544999 SHMT2P34897 504 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 FNTAP49354 379 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 TUBB4BP68371 445 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 TUBB2AQ13885 445 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 TBR1Q16650 682 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 DNAJC21Q5F1R6 531 aaKnown RBP16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ANKRD22Q5VYY1 191 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 PWWP2BQ6NUJ5 590 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 FBXO38Q6PIJ6 1188 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 LRRC6Q86X45 466 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 SLC22A15Q8IZD6 547 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ADGRF3Q8IZF5 1079 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 UNC5BQ8IZJ1 945 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 MCUQ8NE86 351 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 OR8K5Q8NH50 307 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 LKAAEAR1Q8TD35 194 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 GRK7Q8WTQ7 553 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ASZ1Q8WWH4 475 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 CPT1BQ92523 772 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ANP32BQ92688 251 aaKnown RBP16.42■□□□□ 0.22
HOXD8-204ENST00000544999 MED8Q96G25 268 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 PANX3Q96QZ0 392 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ARHGAP9Q9BRR9 750 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 TUBB2BQ9BVA1 445 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 SEMA4CQ9C0C4 833 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 P2RY12Q9H244 342 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 XKR8Q9H6D3 395 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 SOHLH2Q9NX45 425 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ACTR10Q9NZ32 417 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 ICKQ9UPZ9 632 aa16.42■□□□□ 0.22
HOXD8-204ENST00000544999 LOC400499M0QZD8 3231 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 SLC9B1P1A6NJY1 282 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 IQCF5A8MTL0 148 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 KDM1AO60341 852 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 NDUFS3O75489 264 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 TMEM63AO94886 807 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 VAPBO95292 243 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 APOA4P06727 396 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CCNYL3P0C7X3 344 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 ARNTP27540 789 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CSE1LP55060 971 aaKnown RBP16.41■□□□□ 0.22
HOXD8-204ENST00000544999 MC1RQ01726 317 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 HSPA14Q0VDF9 509 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 TMED2Q15363 201 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 PTRHD1Q6GMV3 140 aaKnown RBP16.41■□□□□ 0.22
HOXD8-204ENST00000544999 KIAA0930Q6ICG6 404 aaPredicted RBP16.41■□□□□ 0.22
HOXD8-204ENST00000544999 MRNIPQ6NTE8 343 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CES3Q6UWW8 571 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CAND1Q86VP6 1230 aaKnown RBP16.41■□□□□ 0.22
HOXD8-204ENST00000544999 ZNF843Q8N446 348 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 ZNF501Q96CX3 271 aaPredicted RBP16.41■□□□□ 0.22
HOXD8-204ENST00000544999 RNF31Q96EP0 1072 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CATSPER2Q96P56 530 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 NRTNQ99748 197 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 PITPNM3Q9BZ71 974 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 FANCEQ9HB96 536 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 SYTL2Q9HCH5 934 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 LATS2Q9NRM7 1088 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 IL17BQ9UHF5 180 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CROTQ9UKG9 612 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 CDYLQ9Y232 598 aa16.41■□□□□ 0.22
HOXD8-204ENST00000544999 PIPSLA2A3N6 862 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 AVILO75366 819 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 ST6GAL1P15907 406 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 PAMP19021 973 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 AOAHP28039 575 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 DLSTP36957 453 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 GPR19Q15760 415 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 TYSND1Q2T9J0 566 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 CRTC2Q53ET0 693 aaPredicted RBP16.4■□□□□ 0.22
HOXD8-204ENST00000544999 RNF187Q5TA31 235 aaPredicted RBP16.4■□□□□ 0.22
HOXD8-204ENST00000544999 UNC5AQ6ZN44 842 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 SDCCAG8Q86SQ7 713 aaPredicted RBP16.4■□□□□ 0.22
HOXD8-204ENST00000544999 VRK3Q8IV63 474 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 KRT222Q8N1A0 295 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 OTUD6BQ8N6M0 293 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 EXD3Q8N9H8 876 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 STARD8Q92502 1023 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 PDLIM2Q96JY6 352 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 XAB2Q9HCS7 855 aaKnown RBP16.4■□□□□ 0.22
HOXD8-204ENST00000544999 LHX9Q9NQ69 397 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 OR6C2Q9NZP2 312 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 SAMD15Q9P1V8 674 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 PADI1Q9ULC6 663 aa16.4■□□□□ 0.22
HOXD8-204ENST00000544999 TDRKHQ9Y2W6 561 aaKnown RBP16.4■□□□□ 0.22
HOXD8-204ENST00000544999 MGAQ8IWI9 3026 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 FAM237BA0A1B0GVD1 139 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 MAGEB16A2A368 324 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms