RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TTC7AQ9ULT0 858 aaPredicted RBP30.43■■■□□ 2.46
LDB1-204ENST00000490751 ICKQ9UPZ9 632 aa30.43■■■□□ 2.46
LDB1-204ENST00000490751 TPSB2P20231 275 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 CCR10P46092 362 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 CSE1LP55060 971 aaKnown RBP30.42■■■□□ 2.46
LDB1-204ENST00000490751 TRIP13Q15645 432 aaPredicted RBP30.42■■■□□ 2.46
LDB1-204ENST00000490751 TPSAB1Q15661 275 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 ATP1A1-AS1Q5TC04 95 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 TBC1D21Q8IYX1 336 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 ADGRF3Q8IZF5 1079 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 KCND1Q9NSA2 647 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 GEMIN8Q9NWZ8 242 aaKnown RBP30.42■■■□□ 2.46
LDB1-204ENST00000490751 JRKLQ9Y4A0 524 aa30.42■■■□□ 2.46
LDB1-204ENST00000490751 C2orf74A8MZ97 194 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 ST6GAL1P15907 406 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 MGAT1P26572 445 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 NMBRP28336 390 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 POLE2P56282 527 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 CRTC2Q53ET0 693 aaPredicted RBP30.41■■■□□ 2.46
LDB1-204ENST00000490751 TMEM126BQ8IUX1 230 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 OR8K5Q8NH50 307 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 LKAAEAR1Q8TD35 194 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 CT55Q8WUE5 264 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 TSSK1BQ9BXA7 367 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 PITPNM3Q9BZ71 974 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 STARD5Q9NSY2 213 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 ACTR10Q9NZ32 417 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 KCND3Q9UK17 655 aa30.41■■■□□ 2.46
LDB1-204ENST00000490751 TDRKHQ9Y2W6 561 aaKnown RBP30.41■■■□□ 2.46
LDB1-204ENST00000490751 TCRBV7S3A2A0A539 114 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 CD3EAPO15446 510 aaKnown RBP30.4■■■□□ 2.46
LDB1-204ENST00000490751 KATNA1O75449 491 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 SCRG1O75711 98 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 CCR7P32248 378 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 VPS41P49754 854 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 TERF1P54274 439 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 CDK16Q00536 496 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 DNASE1L3Q13609 305 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 LRRC8BQ6P9F7 803 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 RASGEF1CQ8N431 466 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 OR5K2Q8NHB8 316 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 CARD6Q9BX69 1037 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 ADNPQ9H2P0 1102 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 FANCEQ9HB96 536 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 SYBUQ9NX95 663 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 POLG2Q9UHN1 485 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 PCDHB3Q9Y5E6 796 aa30.4■■■□□ 2.46
LDB1-204ENST00000490751 IQCF5A8MTL0 148 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 CPNE3O75131 537 aaKnown RBP30.39■■■□□ 2.46
LDB1-204ENST00000490751 SHMT2P34897 504 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 TTPAP49638 278 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 DEFB109BQ30KR1 87 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 MS4A14Q96JA4 679 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 PBKQ96KB5 322 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 AP1M1Q9BXS5 423 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 KLHL25Q9H0H3 589 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 AKIRIN1Q9H9L7 192 aaPredicted RBP30.39■■■□□ 2.46
LDB1-204ENST00000490751 GRPEL1Q9HAV7 217 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 LATS2Q9NRM7 1088 aa30.39■■■□□ 2.46
LDB1-204ENST00000490751 PIPSLA2A3N6 862 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 PRMT5O14744 637 aaPredicted RBP30.38■■■□□ 2.45
LDB1-204ENST00000490751 PVRP15151 417 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 HSPA14Q0VDF9 509 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 KCNAB2Q13303 367 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 TTC27Q6P3X3 843 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 UNC5AQ6ZN44 842 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 SLC22A15Q8IZD6 547 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 TRAPPC9Q96Q05 1148 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 FAM117AQ9C073 453 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 PCDHGA6Q9Y5G7 932 aa30.38■■■□□ 2.45
LDB1-204ENST00000490751 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP30.37■■■□□ 2.45
LDB1-204ENST00000490751 TPBGLP0DKB5 382 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 GPS1Q13098 491 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 KCNJ11Q14654 390 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 FAM199XQ6PEV8 388 aaPredicted RBP30.37■■■□□ 2.45
LDB1-204ENST00000490751 SPESP1Q6UW49 350 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 CES3Q6UWW8 571 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 VRK3Q8IV63 474 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 KRT222Q8N1A0 295 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 MAGOHBQ96A72 148 aaKnown RBP30.37■■■□□ 2.45
LDB1-204ENST00000490751 MFSD3Q96ES6 412 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 KIFC1Q9BW19 673 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 SLC25A18Q9H1K4 315 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 MRM3Q9HC36 420 aaKnown RBP30.37■■■□□ 2.45
LDB1-204ENST00000490751 SYTL2Q9HCH5 934 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 PLAGL1Q9UM63 463 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 CDYLQ9Y232 598 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 BOD1L1Q8NFC6 3051 aa30.37■■■□□ 2.45
LDB1-204ENST00000490751 HELZ2Q9BYK8 2649 aaKnown RBP30.36■■■□□ 2.45
LDB1-204ENST00000490751 C21orf140B9A014 251 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 MAP3K7O43318 606 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 KRT14P02533 472 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 ABRQ12979 859 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 ERV3-1Q14264 604 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 DNAJC21Q5F1R6 531 aaKnown RBP30.36■■■□□ 2.45
LDB1-204ENST00000490751 PRAMEF17Q5VTA0 474 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 PTRHD1Q6GMV3 140 aaKnown RBP30.36■■■□□ 2.45
LDB1-204ENST00000490751 TRIM73Q86UV7 250 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 MPP5Q8N3R9 675 aa30.36■■■□□ 2.45
LDB1-204ENST00000490751 OTUD6BQ8N6M0 293 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms