RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 GLRA3O75311 464 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZNF821O75541 412 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CRTAMO95727 393 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MT-CO1P00395 513 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 AHSGP02765 367 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GSTA1P08263 222 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FURINP09958 794 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GABRB3P28472 473 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FOXN2P32314 431 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZNF140P52738 457 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 THOP1P52888 689 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PFN3P60673 137 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RHOAP61586 193 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MC1RQ01726 317 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SULT2A1Q06520 285 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NR6A1Q15406 480 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TAF1AQ15573 450 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 DLG2Q15700 870 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 HHATQ5VTY9 493 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NEPROQ6NW34 567 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LINGO4Q6UY18 593 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SPNS3Q6ZMD2 512 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CDHR3Q6ZTQ4 885 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 KDELC2Q7Z4H8 507 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SPRED1Q7Z699 444 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PIM3Q86V86 326 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SFTPA2Q8IWL1 248 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PLPP6Q8IY26 295 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LRRC34Q8IZ02 419 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 STYXQ8WUJ0 223 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 VPS39Q96JC1 886 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ADGRE3Q9BY15 652 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SLC39A1Q9NY26 324 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 IL1RAPL1Q9NZN1 696 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 HACD3Q9P035 362 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 DCDC2Q9UHG0 476 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 APPL1Q9UKG1 709 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GRID1Q9ULK0 1009 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ANKRD66B4E2M5 251 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TRAFD1O14545 582 aaPredicted RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 BIRC5O15392 142 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 DNAJB5O75953 348 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NADKO95544 446 aaPredicted RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GSRP00390 522 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SRCP12931 536 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CTSEP14091 401 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RPS21P63220 83 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PDE1BQ01064 536 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PPARDQ03181 441 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TRAF2Q12933 501 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 THOC5Q13769 683 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GALNT3Q14435 633 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ELOCQ15369 112 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 QPCTQ16769 361 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 AMZ1Q400G9 498 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ANKS6Q68DC2 871 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ERN2Q76MJ5 926 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CPLX4Q7Z7G2 160 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NRSN1Q8IZ57 195 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NLGN4XQ8N0W4 816 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NDUFAF2Q8N183 169 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NLGN4YQ8NFZ3 816 aaPredicted RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 OR6C4Q8NGE1 309 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GDAP1Q8TB36 358 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RAB3IL1Q8TBN0 382 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 VOPP1Q96AW1 172 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 C19orf60Q96EN9 201 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 EXOC2Q96KP1 924 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TBATAQ96M53 351 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NUDT22Q9BRQ3 303 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RUBCNLQ9H714 662 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MLXIPLQ9NP71 852 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 DYRK4Q9NR20 520 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SNX15Q9NRS6 342 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NLE1Q9NVX2 485 aaPredicted RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SLC17A7Q9P2U7 560 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LRIT1Q9P2V4 623 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FBXO5Q9UKT4 447 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CHKBQ9Y259 395 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MTO1Q9Y2Z2 717 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FCF1Q9Y324 198 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 OAS3Q9Y6K5 1087 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-201ENST00000412640 IGHV5-10-1A0A0J9YXX1 117 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 IGLON5A6NGN9 336 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 C2orf81A6NN90 581 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PRSS44E7EML9 344 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GOLGA8TH3BQL2 631 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 H7C0S8 307 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 K7ERQ8 282 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 B4GAT1O43505 415 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SMAD6O43541 496 aaKnown RBP9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SNX3O60493 162 aa9.34□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PGLSO95336 258 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms