RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 DGKGP49619 791 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 HNRNPFP52597 415 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 RHOAP61586 193 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 AP1S1P61966 158 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 KCNC4Q03721 635 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 KLHL38Q2WGJ6 581 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 DGKKQ5KSL6 1271 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 CARM1Q86X55 608 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 UNC5BQ8IZJ1 945 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 FCRL3Q96P31 734 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 C1orf50Q9BV19 199 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 CD207Q9UJ71 328 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 AP3D1O14617 1153 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TRIM24O15164 1050 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TULP3O75386 442 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 KLHL2O95198 593 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 GSRP00390 522 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 FGF1P05230 155 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 POLBP06746 335 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TPH1P17752 444 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TGFBR1P36897 503 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 CHRNA4P43681 627 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PGGT1BP53609 377 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 KLF10Q13118 480 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ZMYND11Q15326 602 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 GEN1Q17RS7 908 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 AGAP7PQ5VUJ5 663 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 MBLAC2Q68D91 279 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PKN3Q6P5Z2 889 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TMEM102Q8N9M5 508 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PCNPQ8WW12 178 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ZUFSPQ96AP4 578 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 BIRC7Q96CA5 298 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 CHFRQ96EP1 664 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 MYO19Q96H55 970 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TRIM8Q9BZR9 551 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 IL1RL2Q9HB29 575 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 LTB4R2Q9NPC1 389 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PKD2L2Q9NZM6 624 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PLLPQ9Y342 182 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TCAF1Q9Y4C2 921 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PDE4DIPQ5VU43 2346 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 MROH6A6NGR9 719 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SYCE1LA8MT33 242 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 NDST3O95803 873 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 DHRS4L1P0CG22 281 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 IGFBP4P22692 258 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 ARRB2P32121 409 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 HTR2BP41595 481 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 MAPK8P45983 427 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SLC18A1P54219 525 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 TUBB3Q13509 450 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 RUNX3Q13761 415 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 MTSS1LQ765P7 747 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 CELF2-AS1Q8N7Q2 184 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 ATL1Q8WXF7 558 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 EXOC2Q96KP1 924 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 GAS2L1Q99501 681 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF304Q9HCX3 659 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 CHRAC1Q9NRG0 131 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SMYD2Q9NRG4 433 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 TREX1Q9NSU2 369 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SLC25A13Q9UJS0 675 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 ERVW-1Q9UQF0 538 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 BPTFQ12830 3046 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 COL4A2P08572 1712 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SSX4O60224 188 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SRPRAP08240 638 aaKnown RBP9.92□□□□□ -0.82
SYNE1-203ENST00000354674 PSMA3P25788 255 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 EIF2DP41214 584 aaKnown RBP9.92□□□□□ -0.82
SYNE1-203ENST00000354674 ABCG1P45844 678 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 STK19P49842 368 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-203ENST00000354674 TUBA4AP68366 448 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 HTR4Q13639 388 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 PTPRNQ16849 979 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 C22orf39Q6P5X5 142 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 TRMT10BQ6PF06 316 aaKnown RBP9.92□□□□□ -0.82
SYNE1-203ENST00000354674 FKBP9P1Q75LS8 142 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 TICAM1Q8IUC6 712 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SLC22A15Q8IZD6 547 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 CPA6Q8N4T0 437 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 MAPK15Q8TD08 544 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 FRS2Q8WU20 508 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 SLC44A1Q8WWI5 657 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 KXD1Q9BQD3 176 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 RAI2Q9Y5P3 530 aa9.92□□□□□ -0.82
SYNE1-203ENST00000354674 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 GRXCR2A6NFK2 248 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PHGDHO43175 533 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SYNCRIPO60506 623 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ALX3O95076 343 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PAPSS2O95340 614 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SLC6A11P48066 632 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SNTA1Q13424 505 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 IMPG1Q17R60 797 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ATXN7L2Q5T6C5 722 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CASC4Q6P4E1 433 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms