RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 GPR21Q99679 349 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 XKR8Q9H6D3 395 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 IL1RAPQ9NPH3 570 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 KCTD5Q9NXV2 234 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 PQBP1O60828 265 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CLPXO76031 633 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CLDN9O95484 217 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 FUT4P22083 530 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CCR10P46092 362 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 SMAD3P84022 425 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CSTF1Q05048 431 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 SMARCD3Q6STE5 483 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 INO80EQ8NBZ0 244 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF548Q8NEK5 533 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 ASB12Q8WXK4 309 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 NCSTNQ92542 709 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 MYOCQ99972 504 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CFL2Q9Y281 166 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 MEMO1Q9Y316 297 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CXCR6O00574 342 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 EI24O14681 340 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 GABBR2O75899 941 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 LGALS2P05162 132 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 RBM34P42696 430 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 HNRNPFP52597 415 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 PITPNAQ00169 270 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 NAE1Q13564 534 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 DNASE1L3Q13609 305 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 ACAP2Q15057 778 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 TIGD6Q17RP2 521 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CTC1Q2NKJ3 1217 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 TOR1AIP1Q5JTV8 583 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 RHBDF2Q6PJF5 856 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 HAS1Q92839 578 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 KXD1Q9BQD3 176 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 TMEM168Q9H0V1 697 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 AGO3Q9H9G7 860 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 MRTO4Q9UKD2 239 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-201ENST00000291547 TRAV19A0A0A6YYK7 116 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 FUOMA2VDF0 154 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 TTC34A8MYJ7 566 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 CLDN5O00501 218 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 SLC22A1O15245 554 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 PSMD10O75832 226 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 SLC2A2P11168 524 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 OR3A3P47888 321 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 OR3A2P47893 321 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 ARCN1P48444 511 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 HSPA7P48741 367 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 LIMK2P53671 638 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 GBE1Q04446 702 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 CBX2Q14781 532 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 SDHAF4Q5VUM1 108 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 KIAA1324Q6UXG2 1013 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 OTOP3Q7RTS5 596 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 RAVER1Q8IY67 606 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 GJD3Q8N144 294 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 CSPG4P5Q96PW8 444 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 PCDHB18PQ96TA0 734 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 COMMD4Q9H0A8 199 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 RNF38Q9H0F5 515 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 SSU72Q9NP77 194 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 RDH8Q9NYR8 311 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 TCRBV7S2A1N4TA0A589 114 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 RNF225M0QZC1 329 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 ACOX3O15254 700 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 GNAO1P09471 354 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 ELFN1P0C7U0 828 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 CKMT2P17540 419 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 GPD2P43304 727 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 IDH3AP50213 366 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 PRKD1Q15139 912 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 LDB1Q86U70 411 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 PCDHB1Q9Y5F3 818 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 SPIN1Q9Y657 262 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 FMO3P31513 532 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 ADRA1BP35368 520 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MAPK12P53778 367 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MERTKQ12866 999 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 IFI44LQ53G44 452 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 C2orf73Q8N5S3 287 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 OR4C6Q8NH72 309 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 PRRG4Q9BZD6 226 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MIOSQ9NXC5 875 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 C4AP0C0L4 1744 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MANSC4A6NHS7 340 aaPredicted RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 J3QRK9 145 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 GADD45GO95257 159 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 UBA1P22314 1058 aaKnown RBP10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 ACSL1P33121 698 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 MPP1Q00013 466 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF311Q5JNZ3 666 aa10.57□□□□□ -0.72
PKNOX1-201ENST00000291547 SLC26A9Q7LBE3 791 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms