RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 LCN1P31025 176 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 HADHBP55084 474 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CAPSQ13938 189 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TSTD2Q5T7W7 516 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 HMBOX1Q6NT76 420 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 RFWD3Q6PCD5 774 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ADGRD2Q7Z7M1 963 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC22A16Q86VW1 577 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 OR2L8Q8NGY9 312 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SGCDQ92629 289 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 FUZQ9BT04 418 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 FTHL17Q9BXU8 183 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 LYARQ9NX58 379 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SLIT1O75093 1534 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TMEM150BA6NC51 233 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 DLGAP1O14490 977 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GABRDO14764 452 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC7A4O43246 635 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 FAM155BO75949 473 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ALPPP05187 535 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GNG2P59768 71 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ERVK-8P63133 956 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TARDBPQ13148 414 aaKnown RBP eCLIP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GRK1Q15835 563 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 DEFB128Q7Z7B8 93 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 HAS1Q92839 578 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 COL21A1Q96P44 957 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 PCDHB18PQ96TA0 734 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TFB2MQ9H5Q4 396 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ELAC1Q9H777 363 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SNX10Q9Y5X0 201 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 COLEC10Q9Y6Z7 277 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 PIAS1O75925 651 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 BMP6P22004 513 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GADD45AP24522 165 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 MAP3K8P41279 467 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 MRPS6P82932 125 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 EML3Q32P44 896 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 NCEH1Q6PIU2 408 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF627Q7L945 461 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 KAT2AQ92830 837 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 RNF38Q9H0F5 515 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF700Q9H0M5 742 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 EBF2Q9HAK2 575 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CDC42BPBQ9Y5S2 1711 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 YDJCA8MPS7 323 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 MFSD11O43934 449 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 DNAJB5O75953 348 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 MATN4O95460 622 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 XKP51811 444 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TAS2R43P59537 309 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SMAD3P84022 425 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 MC1RQ01726 317 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 BNIP3Q12983 259 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 NAE1Q13564 534 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF404Q494X3 552 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CRY2Q49AN0 593 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CDKL4Q5MAI5 379 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 OR10G6Q8NH81 332 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 KLHL6Q8WZ60 621 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TESCQ96BS2 214 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TRIM36Q9NQ86 728 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TMEM184CQ9NVA4 438 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 DUXAA6NLW8 204 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 DISC1C4P0D8 188 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC19A2O60779 497 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 OR4F21O95013 312 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 AGR2O95994 175 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 CYP17A1P05093 508 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 ITGB1P05556 798 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 DPEP1P16444 411 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 PTPRAP18433 802 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 FMO3P31513 532 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 RYKP34925 604 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 CTBP2P56545 445 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 CHIT1Q13231 466 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 PARGQ86W56 976 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 HID1Q8IV36 788 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 ZMIZ2Q8NF64 920 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 ZBED6CLQ96FA7 236 aaPredicted RBP8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 METTL8Q9H825 291 aaKnown RBP8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 CYTH4Q9UIA0 394 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 NR2E1Q9Y466 385 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 RNF17Q9BXT8 1623 aaKnown RBP8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 M0R233 179 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 NOBOXO60393 691 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 MT-ND1P03886 318 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 GLDCP23378 1020 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 PTGER3P43115 390 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 CD83Q01151 205 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 PPM1JQ5JR12 505 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 FKBP1CQ5VVH2 108 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 MON1BQ7L1V2 547 aa8.56□□□□□ -1.04
SCUBE3-201ENST00000274938 CYP2U1Q7Z449 544 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms