RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Atf4Q06507 349 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Nell2Q61220 819 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tmem198Q8BG75 360 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 MfrpQ8K480 584 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Olfr1052Q8VGR8 312 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Asb17Q8VHP9 295 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Acsm1Q91VA0 573 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Laptm4bQ91XQ6 227 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Prps2Q9CS42 318 aa13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Trim2Q9ESN6 744 aaKnown RBP13.78□□□□□ -0.2
Col3a1-201ENSMUST00000087883 MndaP0DOV1 425 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Marveld2Q3UZP0 555 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 ZyxQ62523 564 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Usf2Q64705 346 aaKnown RBP13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Olfr699Q7TRN3 316 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Olfr700Q8VFM5 316 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Lpin1Q91ZP3 924 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Klhl22Q99JN2 634 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 4933436I01RikQ9D3T1 429 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Exosc1Q9DAA6 195 aaKnown RBP13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tor1bQ9ER41 336 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Inpp5eQ9JII1 647 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Olfr596F8VQ26 312 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Fkbp7O54998 218 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Itgb1P09055 798 aaKnown RBP13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Pax3P24610 479 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Mmp3P28862 477 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Arl5cQ6P068 179 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Havcr2Q8VIM0 281 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Map4k3Q99JP0 894 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Alg13Q9D8C3 1166 aaKnown RBP13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ap1m2Q9WVP1 423 aa13.77□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ube2ql1A0PJN4 161 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lrig1P70193 1091 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm813Q3UWK9 176 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tas2r129Q7M709 320 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Fignl1Q8BPY9 683 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lrrc19Q8BZT5 364 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tmem259Q8CIV2 574 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Sgpl1Q8R0X7 568 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 RhoqQ8R527 205 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Atg13Q91YI1 516 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Acbd6Q9D061 282 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Agpat3Q9D517 376 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Plscr1Q9JJ00 328 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tlr4Q9QUK6 835 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Anxa2P07356 339 aaKnown RBP13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pgk1P09411 417 aaKnown RBP13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tgm3Q08189 693 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tas2r38Q7TQA6 331 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr664Q7TRP5 306 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Q810M1 233 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Samd7Q8C8Y5 445 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Plcz1Q8K4D7 647 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Zmynd11Q8R5C8 602 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr345Q8VGK4 311 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Q99KU6 348 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mrps33Q9D2R8 106 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Fam90a1bQ9D4F3 419 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Znf207Q9JMD0 495 aaKnown RBP13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ehd1Q9WVK4 534 aaKnown RBP13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm8444F6XS56 118 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 S100a2J3QMC7 104 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pmm1O35621 262 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Agtr2P35374 363 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rps14P62264 151 aaKnown RBP13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Elmod1Q3V1U8 326 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Spin1Q61142 262 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Q810N5 247 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ptgr2Q8VDQ1 351 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Dnase1l2Q9D1G0 278 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rgs1Q9JL25 209 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Trim3Q9R1R2 744 aa13.77□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Qser1A2BIE1 1698 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ttll3A4Q9E5 927 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Aldh3b3J3QMK6 479 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Chrna4O70174 629 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rph3aP47708 681 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Klhl8P59280 629 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 GiprQ0P543 460 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 OgnQ62000 298 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Prkd1Q62101 918 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Trmt2bQ8BQJ6 493 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cdk5rap2Q8K389 1822 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mrgpra1Q91WW5 304 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Hsd3b7Q9EQC1 369 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr742A2RTP5 311 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Klhl33G3UW92 533 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cpne9Q1RLL3 553 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Qsox2Q3TMX7 692 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Obox3Q3UT54 335 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Znf366Q6NS86 746 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pcdhb4Q91XZ6 784 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Hspa14Q99M31 509 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cldn22Q9D7U6 220 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm5565A0A0G2JGB2 317 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr1049A2ARZ0 308 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm9493F6SVV1 192 aaKnown RBP13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Resp18P47939 175 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mthfd1lQ3V3R1 977 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms