RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CXADRP78310 365 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 PLOD1Q02809 727 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 PTK6Q13882 451 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 MRNIPQ6NTE8 343 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 CEACAM20Q6UY09 585 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 DTX1Q86Y01 620 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 PHC3Q8NDX5 983 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 OR4E2Q8NGC2 313 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 LKAAEAR1Q8TD35 194 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 KLHL6Q8WZ60 621 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 FCRL3Q96P31 734 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 TEFMQ96QE5 360 aaKnown RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 CD180Q99467 661 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 CTRCQ99895 268 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 TRIM56Q9BRZ2 755 aaKnown RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 CARD6Q9BX69 1037 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 P2RY12Q9H244 342 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 CPNE5Q9HCH3 593 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 APMAPQ9HDC9 416 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 WDR70Q9NW82 654 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 SNRNP200O75643 2136 aaKnown RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 IGHV5-51A0A0C4DH38 117 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 FAM237BA0A1B0GVD1 139 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 IQCF5A8MTL0 148 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 BHMG1C9JSJ3 638 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 DNALI1O14645 258 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 POLR1CO15160 346 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 ACADLP28330 430 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 CCR7P32248 378 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 CSE1LP55060 971 aaKnown RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 DHX34Q14147 1143 aaKnown RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 DNTTIP2Q5QJE6 756 aaKnown RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 PTRHD1Q6GMV3 140 aaKnown RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 ARMC6Q6NXE6 501 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 SDCCAG8Q86SQ7 713 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 LRRC6Q86X45 466 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 KLHL7Q8IXQ5 586 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 KRT222Q8N1A0 295 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 AGGF1Q8N302 714 aaeCLIP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 OR52E1Q8NGJ3 308 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 LCN9Q8WX39 176 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 UBXN4Q92575 508 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 ZNF669Q96BR6 464 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 RUNDC3BQ96NL0 473 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 CCNL2Q96S94 520 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 MAP3K3Q99759 626 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 ZPBPQ9BS86 351 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 HGH1Q9BTY7 390 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 SRMSQ9H3Y6 488 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 TFB2MQ9H5Q4 396 aaKnown RBP14.95□□□□□ -0.02
CPSF1-210ENST00000532935 SEMA5BQ9P283 1151 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 GNPTGQ9UJJ9 305 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 ASF1AQ9Y294 204 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 PCDHB11Q9Y5F2 797 aa14.95□□□□□ -0.02
CPSF1-210ENST00000532935 UBA6A0AVT1 1052 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 TLCD2A6NGC4 264 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 GPC4O75487 556 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 NELFEP18615 380 aaKnown RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 POLR2CP19387 275 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 RPS3P23396 243 aaKnown RBP eCLIP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 AOAHP28039 575 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 PAFAH1B1P43034 410 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 KPNA2P52292 529 aaKnown RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 EIF3BP55884 814 aaKnown RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 SH3BP2P78314 561 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 FOXM1Q08050 763 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 PRKAA1Q13131 559 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 PRKG2Q13237 762 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 TYSND1Q2T9J0 566 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 RNF187Q5TA31 235 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 GPR155Q7Z3F1 870 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 PCGF5Q86SE9 256 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 TMEM135Q86UB9 458 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 TBC1D21Q8IYX1 336 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 SLC22A15Q8IZD6 547 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 C17orf53Q8N3J3 647 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 OR5AR1Q8NGP9 310 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 ASZ1Q8WWH4 475 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 SIGLEC10Q96LC7 697 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 PANX3Q96QZ0 392 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 TCF12Q99081 682 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 TRIT1Q9H3H1 467 aaKnown RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 IL1RAPL1Q9NZN1 696 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 RNF14Q9UBS8 474 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 CDYLQ9Y232 598 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 MAD1L1Q9Y6D9 718 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 RPS6KL1Q9Y6S9 549 aa14.94□□□□□ -0.02
CPSF1-210ENST00000532935 SMG1Q96Q15 3661 aaKnown RBP14.94□□□□□ -0.02
CPSF1-210ENST00000532935 CCDC188H7C350 402 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 MATN2O00339 956 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 PFDN6O15212 129 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 APOA4P06727 396 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 OGNP20774 298 aaKnown RBP14.93□□□□□ -0.02
CPSF1-210ENST00000532935 IVDP26440 423 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 DR1Q01658 176 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 VAC14Q08AM6 782 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 HSPA14Q0VDF9 509 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 SRSF6Q13247 344 aaKnown RBP14.93□□□□□ -0.02
CPSF1-210ENST00000532935 TMED2Q15363 201 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms