RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
TMC1-201ENST00000297784 KLHL25Q9H0H3 589 aa6.55□□□□□ -1.36
TMC1-201ENST00000297784 NOL11Q9H8H0 719 aaKnown RBP6.55□□□□□ -1.36
TMC1-201ENST00000297784 MRM3Q9HC36 420 aaKnown RBP6.55□□□□□ -1.36
TMC1-201ENST00000297784 PLXNB3Q9ULL4 1909 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 C1orf232A0A0U1RR37 186 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 GRID2O43424 1007 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ADH1CP00326 375 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 GRIA3P42263 894 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 RPL14P50914 215 aaKnown RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 PRAMEP78395 509 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MLLT1Q03111 559 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 CDC20Q12834 499 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 SF3B4Q15427 424 aaKnown RBP eCLIP6.54□□□□□ -1.36
TMC1-201ENST00000297784 ATP6AP1Q15904 470 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 IER5LQ5T953 404 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 GTF2IRD2BQ6EKJ0 949 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 C8orf82Q6P1X6 216 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 NAPRTQ6XQN6 538 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 HACD2Q6Y1H2 254 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 Q6ZVU0 165 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 USP51Q70EK9 711 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 VASH1Q7L8A9 365 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 CLEC14AQ86T13 490 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 GTF2IRD2Q86UP8 949 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 IQCF2Q8IXL9 164 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 PARP8Q8N3A8 854 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 TMCO5AQ8N6Q1 288 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 RNF148Q8N7C7 305 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CHST14Q8NCH0 376 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ABHD11Q8NFV4 315 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 LILRB4Q8NHJ6 448 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CHAC2Q8WUX2 184 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 ECHDC3Q96DC8 303 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 C9orf16Q9BUW7 83 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 RAD21L1Q9H4I0 556 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 C20orf96Q9NUD7 363 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 WDR70Q9NW82 654 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 QPCTLQ9NXS2 382 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CDYLQ9Y232 598 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CARD8Q9Y2G2 431 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ARIH1Q9Y4X5 557 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 WASH3PC4AMC7 463 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 KMOO15229 486 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ECI2O75521 394 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MYO1DO94832 1006 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 PGLSO95336 258 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 NDST3O95803 873 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 GNAO1P09471 354 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CKMT2P17540 419 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 HLA-DPA1P20036 260 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MATN1P21941 496 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 PSMA3P25788 255 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 RPL10P27635 214 aaKnown RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 OPRL1P41146 370 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 LEPRP48357 1165 aaKnown RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 SOX9P48436 509 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MLLT10P55197 1068 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 IFITM2Q01629 132 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ACVR1Q04771 509 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 PRKAA1Q13131 559 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 HTR4Q13639 388 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 DMC1Q14565 340 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MAPRE2Q15555 327 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CCDC85BQ15834 202 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 TIGD2Q4W5G0 525 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CCNYL2Q5T2Q4 361 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 C22orf39Q6P5X5 142 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 SPNS2Q8IVW8 549 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CNTN4Q8IWV2 1026 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ZNF366Q8N895 744 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 RDH11Q8TC12 318 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 BRSK1Q8TDC3 778 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 TXNDC15Q96J42 360 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MAGED4Q96JG8 741 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 SLC45A3Q96JT2 553 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MAELQ96JY0 434 aaKnown RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 RIPOR3Q96MK2 946 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 HOXD1Q9GZZ0 328 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 SIAEQ9HAT2 523 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ZDHHC4Q9NPG8 344 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 SACM1LQ9NTJ5 587 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CCM2LQ9NUG4 571 aaPredicted RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 PCDHB9Q9Y5E1 797 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 SHISA7A6NL88 538 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 M0QX08 132 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 AP3B1O00203 1094 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 RASAL1O95294 804 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 NFATC1O95644 943 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 MPOP05164 745 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 FGF1P05230 155 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 APOA4P06727 396 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 ALPIP09923 528 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 TCEA1P23193 301 aaKnown RBP6.54□□□□□ -1.36
TMC1-201ENST00000297784 GDI1P31150 447 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CAPGP40121 348 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 CSRP3P50461 194 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 PGGT1BP53609 377 aa6.54□□□□□ -1.36
TMC1-201ENST00000297784 OCA2Q04671 838 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms