RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 AjubaQ91XC0 547 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Dlg2Q91XM9 852 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 PrkxQ922R0 355 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cldnd1Q9CQX5 253 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Hnrnpa0Q9CX86 305 aaKnown RBP18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Fbxl20Q9CZV8 436 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc22a17Q9D9E0 401 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 AcadsbQ9DBL1 432 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Rpl9-ps6A0A140T8T4 192 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 1810010D01RikA0A1L1SR87 51 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gm11758A2BEI6 360 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gm11757A2BEI8 360 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Itih4A6X935 942 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Skint11A7XV14 364 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Tmem45a2B7ZWJ5 289 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Herc6F2Z461 1003 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Kcnk4O88454 398 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gpr3P35413 330 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gpx3P46412 226 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Rpl9P51410 192 aaKnown RBP18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cacna1cQ01815 2139 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Lrfn1Q2WF71 766 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cyb5r4Q3TDX8 528 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Akr1clQ3UXL1 322 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 SynaQ5G5D5 617 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc6a4Q60857 630 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Abcb7Q61102 752 aaKnown RBP18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc25a23Q6GQS1 467 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ces2bQ6PDB7 556 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Mtmr12Q80TA6 747 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ppp1r1cQ8BKK4 108 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Olfr677Q8VF06 312 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Olfr866Q8VFI7 312 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Prb1Q91X93 504 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Marc1Q9CW42 340 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc28a3Q9ERH8 703 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Il1rl2Q9ERS7 574 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 PrebQ9WUQ2 417 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Krt6bQ9Z331 562 aa18.01■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gm4869A0A1B0GSG7 984 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Aldoart1A6ZI46 419 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Fbrsl1E9Q9T0 1031 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Polr2jO08740 117 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 CidecP56198 239 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Alg6Q3TAE8 507 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Arnt2Q61324 712 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 HiraQ61666 1015 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Pcbp2Q61990 362 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ssr4Q62186 172 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Rbl1Q64701 1063 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Krba1Q6NXZ1 1043 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ddx51Q6P9R1 639 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Zmpste24Q80W54 475 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 FicdQ8BIX9 458 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 UnkQ8BL48 810 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Fignl1Q8BPY9 683 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ccdc59Q8R2N0 240 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Atg13Q91YI1 516 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Scd3Q99PL7 359 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Snx2Q9CWK8 519 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Mpp6Q9JLB0 553 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 B9d1Q9R1S0 204 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc28a1E9PXX9 648 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Obox5G3X9P6 291 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gm6614M0QWR8 670 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Sec22bO08547 215 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 InaP46660 501 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ybx1P62960 322 aaKnown RBP18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Aqp1Q02013 269 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 IqcmQ149I8 489 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 DhpsQ3TXU5 369 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cyp4b1Q64462 511 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc13a5Q67BT3 572 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cypt4Q6P925 153 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 InavaQ7TN12 663 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Nrde2Q80XC6 1172 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ppp1r15bQ8BFW3 697 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Noc4lQ8BHY2 516 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Tyw1Q8BJM7 721 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Tusc3Q8BTV1 347 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ifi44Q8BV66 422 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Tmc7Q8C428 726 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cacnb2Q8CC27 655 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Lancl3Q8CD19 420 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Tp53bp2Q8CG79 1128 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc35b4Q8CIA5 331 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Atg10Q8R1P4 215 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Cox18Q8VC74 331 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Yaf2Q99LW6 179 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Sae1Q9R1T2 350 aa18■□□□□ 0.47
Trim47-202ENSMUST00000106441 Col4a4Q9QZR9 1682 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Gm3604A0A087WPN2 559 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Alkal1J3QPP8 127 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Ech1O35459 327 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Emp3O35912 163 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Anxa6P14824 673 aaKnown RBP17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Pou5f1P20263 352 aaKnown RBP17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Psmd7P26516 321 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Mapkapk2P49138 386 aa17.99■□□□□ 0.47
Trim47-202ENSMUST00000106441 Slc30a3P97441 388 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms