Protein–RNA interactions for Protein: Q8BKK4

Ppp1r1c, Protein phosphatase 1 regulatory subunit 1C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r1cQ8BKK4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ppp1r1cQ8BKK4 Gm25239-201ENSMUST00000174915 86 ntBASIC32.89■■■□□ 2.86
Ppp1r1cQ8BKK4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ppp1r1cQ8BKK4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
Ppp1r1cQ8BKK4 Psd-208ENSMUST00000224556 2034 ntBASIC31■■■□□ 2.55
Ppp1r1cQ8BKK4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ppp1r1cQ8BKK4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ppp1r1cQ8BKK4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ppp1r1cQ8BKK4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ppp1r1cQ8BKK4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ppp1r1cQ8BKK4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Ppp1r1cQ8BKK4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ppp1r1cQ8BKK4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ppp1r1cQ8BKK4 Gm15042-201ENSMUST00000120212 883 ntBASIC29.64■■■□□ 2.34
Ppp1r1cQ8BKK4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ppp1r1cQ8BKK4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ppp1r1cQ8BKK4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.47■■■□□ 2.31
Ppp1r1cQ8BKK4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ppp1r1cQ8BKK4 Gm15045-201ENSMUST00000117359 883 ntBASIC29.15■■■□□ 2.26
Ppp1r1cQ8BKK4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ppp1r1cQ8BKK4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
Ppp1r1cQ8BKK4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ppp1r1cQ8BKK4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ppp1r1cQ8BKK4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ppp1r1cQ8BKK4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ppp1r1cQ8BKK4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.58■■■□□ 2.17
Ppp1r1cQ8BKK4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Ppp1r1cQ8BKK4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ppp1r1cQ8BKK4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ppp1r1cQ8BKK4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ppp1r1cQ8BKK4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ppp1r1cQ8BKK4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ppp1r1cQ8BKK4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.44■■■□□ 2.14
Ppp1r1cQ8BKK4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ppp1r1cQ8BKK4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.32■■■□□ 2.12
Ppp1r1cQ8BKK4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ppp1r1cQ8BKK4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ppp1r1cQ8BKK4 Gm24109-201ENSMUST00000175489 103 ntBASIC28.11■■■□□ 2.09
Ppp1r1cQ8BKK4 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.07■■■□□ 2.08
Ppp1r1cQ8BKK4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ppp1r1cQ8BKK4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ppp1r1cQ8BKK4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.95■■■□□ 2.07
Ppp1r1cQ8BKK4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ppp1r1cQ8BKK4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.76■■■□□ 2.04
Ppp1r1cQ8BKK4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ppp1r1cQ8BKK4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ppp1r1cQ8BKK4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ppp1r1cQ8BKK4 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.6■■■□□ 2.01
Ppp1r1cQ8BKK4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ppp1r1cQ8BKK4 Gm23366-201ENSMUST00000175022 89 ntBASIC27.59■■■□□ 2.01
Ppp1r1cQ8BKK4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ppp1r1cQ8BKK4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ppp1r1cQ8BKK4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ppp1r1cQ8BKK4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ppp1r1cQ8BKK4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Ppp1r1cQ8BKK4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ppp1r1cQ8BKK4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ppp1r1cQ8BKK4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ppp1r1cQ8BKK4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ppp1r1cQ8BKK4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ppp1r1cQ8BKK4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.26■■□□□ 1.95
Ppp1r1cQ8BKK4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ppp1r1cQ8BKK4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ppp1r1cQ8BKK4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.21■■□□□ 1.95
Ppp1r1cQ8BKK4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ppp1r1cQ8BKK4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Ppp1r1cQ8BKK4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ppp1r1cQ8BKK4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Ppp1r1cQ8BKK4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ppp1r1cQ8BKK4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ppp1r1cQ8BKK4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ppp1r1cQ8BKK4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ppp1r1cQ8BKK4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ppp1r1cQ8BKK4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ppp1r1cQ8BKK4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Ppp1r1cQ8BKK4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ppp1r1cQ8BKK4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ppp1r1cQ8BKK4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
Ppp1r1cQ8BKK4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ppp1r1cQ8BKK4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ppp1r1cQ8BKK4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ppp1r1cQ8BKK4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Ppp1r1cQ8BKK4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ppp1r1cQ8BKK4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ppp1r1cQ8BKK4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ppp1r1cQ8BKK4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ppp1r1cQ8BKK4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ppp1r1cQ8BKK4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Ppp1r1cQ8BKK4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.39■■□□□ 1.81
Ppp1r1cQ8BKK4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ppp1r1cQ8BKK4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ppp1r1cQ8BKK4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ppp1r1cQ8BKK4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r1cQ8BKK4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ppp1r1cQ8BKK4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ppp1r1cQ8BKK4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.24■■□□□ 1.79
Ppp1r1cQ8BKK4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ppp1r1cQ8BKK4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ppp1r1cQ8BKK4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ppp1r1cQ8BKK4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms