RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Arl14Q3SXC5 192 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 FaddQ61160 205 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 R3hcc1lQ8BJM3 775 aaKnown RBP11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fmo9Q8C116 539 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pphln1Q8K2H1 381 aaKnown RBP11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ero1bQ8R2E9 467 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mrgpra2Q91WW4 305 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ptgr1Q91YR9 329 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Clic1Q9Z1Q5 241 aaKnown RBP11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc25a54B1AUS6 473 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Otud3B1AZ99 396 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm21738J3QP72 227 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 GzmkO35205 263 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Atxn1lP0C7T6 687 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tap1P21958 724 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ccbe1Q3MI99 408 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ccser2Q3UHI0 833 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ms4a15Q3UPL6 245 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 MafkQ61827 156 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cypt2Q6P924 180 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Suz12Q80U70 741 aaKnown RBP11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rftn2Q8CHX7 500 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Stx19Q8R1Q0 292 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn1r24Q8R2D6 296 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr1047Q8VGS0 319 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Lrrc49Q91YK0 686 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mfsd10Q9D2V8 456 aaKnown RBP11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Asah2Q9JHE3 756 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 A0A286YD17 136 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tbkbp1A2A9T0 611 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm20828J3KMI7 228 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Anxa3O35639 323 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 St3gal5O88829 414 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Akt1P31750 480 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 LeprP48356 1162 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hpcal1P62748 193 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Apoa1Q00623 264 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 MocosQ14CH1 862 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ap5b1Q3TAP4 876 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zyg11bQ3UFS0 744 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mgat5bQ765H6 792 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn2r81Q80Z09 865 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rab39aQ8BHD0 217 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gjd4Q8BSD4 364 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nup54Q8BTS4 510 aaKnown RBP11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Bdh2Q8JZV9 245 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp940Q8R2Q3 566 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Blzf1Q8R2X8 403 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cryl1Q99KP3 319 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dph2Q9CR25 489 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Atad1Q9D5T0 361 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CenpkQ9ESN5 271 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 DguokQ9QX60 277 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cyp2g1Q9WV19 494 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rpl9-ps1S4R1R7 191 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tex28B1AYN9 409 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm6569D3YTM9 175 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr521E9Q519 321 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm16506F7ANP4 213 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cops4O88544 406 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 JunbP09450 344 aaKnown RBP11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zfp14P10755 501 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Csn1s1P19228 313 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 TP20293 436 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rnf43Q5NCP0 784 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Krtcap2Q5RL79 136 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Foxb2Q64733 428 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Lix1Q6P566 282 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc39a4Q78IQ7 660 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mtmr10Q7TPM9 771 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Arrdc3Q7TPQ9 414 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fstl5Q8BFR2 847 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Znf668Q8K2R5 619 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ppp1r14cQ8R4S0 164 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Capn8Q91VA3 703 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tnfsf13Q9D777 241 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cyp4v2Q9DBW0 525 aa11.15□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mrgpra2aA0A0R4J1Z0 331 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hoxa2P31245 372 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Sox6P40645 827 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cyp2c39P56656 490 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zscan26Q5RJ54 466 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Has1Q61647 583 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Wnt8aQ64527 354 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc39a10Q6P5F6 833 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fam126aQ6P9N1 521 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr1313Q7TQW8 311 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Q810N5 247 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ppp1r1cQ8BKK4 108 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Clec9aQ8BRU4 238 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Thap1Q8CHW1 210 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hmgcs1Q8JZK9 520 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Prrg2Q8R182 198 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mrps18aQ99N85 196 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Klhl28Q9CR40 571 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 2310003L06RikQ9CV82 495 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 D830030K20RikE9PYQ5 218 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm3043K7N693 218 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 FiglaO55208 194 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dhcr7O88455 471 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms