Protein–RNA interactions for Protein: S4R1R7

Rpl9-ps1, MCG50795, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps1S4R1R7 Gm25239-201ENSMUST00000174915 86 ntBASIC39.28■■■■□ 3.88
Rpl9-ps1S4R1R7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
Rpl9-ps1S4R1R7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Rpl9-ps1S4R1R7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Rpl9-ps1S4R1R7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Rpl9-ps1S4R1R7 Gm15042-201ENSMUST00000120212 883 ntBASIC34.73■■■■□ 3.15
Rpl9-ps1S4R1R7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
Rpl9-ps1S4R1R7 Gm15045-201ENSMUST00000117359 883 ntBASIC34.04■■■■□ 3.04
Rpl9-ps1S4R1R7 Gm24109-201ENSMUST00000175489 103 ntBASIC33.86■■■■□ 3.01
Rpl9-ps1S4R1R7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Rpl9-ps1S4R1R7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Rpl9-ps1S4R1R7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rpl9-ps1S4R1R7 Psd-208ENSMUST00000224556 2034 ntBASIC33.05■■■□□ 2.88
Rpl9-ps1S4R1R7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.98■■■□□ 2.87
Rpl9-ps1S4R1R7 Gm23366-201ENSMUST00000175022 89 ntBASIC32.89■■■□□ 2.86
Rpl9-ps1S4R1R7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Rpl9-ps1S4R1R7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Rpl9-ps1S4R1R7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Rpl9-ps1S4R1R7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Rpl9-ps1S4R1R7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpl9-ps1S4R1R7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rpl9-ps1S4R1R7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rpl9-ps1S4R1R7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Rpl9-ps1S4R1R7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rpl9-ps1S4R1R7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.23■■■□□ 2.75
Rpl9-ps1S4R1R7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rpl9-ps1S4R1R7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rpl9-ps1S4R1R7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rpl9-ps1S4R1R7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Rpl9-ps1S4R1R7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rpl9-ps1S4R1R7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.85■■■□□ 2.69
Rpl9-ps1S4R1R7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.78■■■□□ 2.68
Rpl9-ps1S4R1R7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rpl9-ps1S4R1R7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rpl9-ps1S4R1R7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.26■■■□□ 2.59
Rpl9-ps1S4R1R7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.25■■■□□ 2.59
Rpl9-ps1S4R1R7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rpl9-ps1S4R1R7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rpl9-ps1S4R1R7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rpl9-ps1S4R1R7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rpl9-ps1S4R1R7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rpl9-ps1S4R1R7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.99■■■□□ 2.55
Rpl9-ps1S4R1R7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rpl9-ps1S4R1R7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Rpl9-ps1S4R1R7 Gm25238-201ENSMUST00000174914 89 ntBASIC30.87■■■□□ 2.53
Rpl9-ps1S4R1R7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.84■■■□□ 2.53
Rpl9-ps1S4R1R7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.83■■■□□ 2.53
Rpl9-ps1S4R1R7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rpl9-ps1S4R1R7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rpl9-ps1S4R1R7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rpl9-ps1S4R1R7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rpl9-ps1S4R1R7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rpl9-ps1S4R1R7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rpl9-ps1S4R1R7 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.68■■■□□ 2.5
Rpl9-ps1S4R1R7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpl9-ps1S4R1R7 Gm27325-201ENSMUST00000175467 74 ntBASIC30.54■■■□□ 2.48
Rpl9-ps1S4R1R7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rpl9-ps1S4R1R7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rpl9-ps1S4R1R7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rpl9-ps1S4R1R7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.43■■■□□ 2.46
Rpl9-ps1S4R1R7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
Rpl9-ps1S4R1R7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.34■■■□□ 2.45
Rpl9-ps1S4R1R7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.33■■■□□ 2.45
Rpl9-ps1S4R1R7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rpl9-ps1S4R1R7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rpl9-ps1S4R1R7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Rpl9-ps1S4R1R7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rpl9-ps1S4R1R7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rpl9-ps1S4R1R7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.14■■■□□ 2.42
Rpl9-ps1S4R1R7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Rpl9-ps1S4R1R7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rpl9-ps1S4R1R7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rpl9-ps1S4R1R7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.09■■■□□ 2.41
Rpl9-ps1S4R1R7 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.03■■■□□ 2.4
Rpl9-ps1S4R1R7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.02■■■□□ 2.4
Rpl9-ps1S4R1R7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Rpl9-ps1S4R1R7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rpl9-ps1S4R1R7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Rpl9-ps1S4R1R7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
Rpl9-ps1S4R1R7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.81■■■□□ 2.36
Rpl9-ps1S4R1R7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Rpl9-ps1S4R1R7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpl9-ps1S4R1R7 Rab21-202ENSMUST00000218831 843 ntBASIC29.72■■■□□ 2.35
Rpl9-ps1S4R1R7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpl9-ps1S4R1R7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpl9-ps1S4R1R7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpl9-ps1S4R1R7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpl9-ps1S4R1R7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.56■■■□□ 2.32
Rpl9-ps1S4R1R7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rpl9-ps1S4R1R7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.46■■■□□ 2.31
Rpl9-ps1S4R1R7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rpl9-ps1S4R1R7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Rpl9-ps1S4R1R7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Rpl9-ps1S4R1R7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rpl9-ps1S4R1R7 Gm25262-201ENSMUST00000174934 133 ntBASIC29.39■■■□□ 2.3
Rpl9-ps1S4R1R7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Rpl9-ps1S4R1R7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rpl9-ps1S4R1R7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rpl9-ps1S4R1R7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rpl9-ps1S4R1R7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.25■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms