RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Mtif2Q91YJ5 727 aaKnown RBP8.35□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ferd3lQ923Z4 168 aa8.35□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Prmt1Q9JIF0 371 aa8.35□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Vmn2r24D3YUI0 854 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 F3P20352 294 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pabpc1P29341 636 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Capza2P47754 286 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Sap25Q1EHW4 186 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Slc25a23Q6GQS1 467 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 ScapQ6GQT6 1276 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Rexo4Q6PAQ4 432 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Olfr1036Q7TR85 310 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Cpsf4Q8BQZ5 211 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tp53bp2Q8CG79 1128 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 TrhdeQ8K093 1025 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Slc45a3Q8K0H7 553 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Mettl22Q8R1C6 393 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Chrna3Q8R4G9 499 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Smim14Q91VT8 99 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Atg13Q91YI1 516 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 EedQ921E6 441 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Spata1Q9D5R4 444 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tex22Q9D9U4 189 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tssc4Q9JHE7 317 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Nectin1Q9JKF6 515 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pramef20B1ARV6 477 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Cilp2D3Z7H8 1162 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Slc28a1E9PXX9 648 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Vmn2r116E9Q6I0 856 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Bnc1O35914 961 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Elovl3O35949 271 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 HcrtO55241 130 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Sp1O89090 784 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Cdh1P09803 884 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Wnt6P22727 364 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 PtpaP58389 323 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 TgfbiP82198 683 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 PgrQ00175 926 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 VclQ64727 1066 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Scn4bQ7M729 228 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Olfr1080Q7TR67 313 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Btnl1Q7TST0 509 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Fignl1Q8BPY9 683 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pggt1bQ8BUY9 377 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Aim2Q91VJ1 354 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Col25a1Q99MQ5 666 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Zfp773Q9CZ29 471 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Tspan11Q9D1D1 253 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Haus5Q9D786 619 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Grin3aA2AIR5 1135 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Btnl6A2CG22 539 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Bub1O08901 1058 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pxmp2P42925 194 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 WasP70315 520 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ctnnb1Q02248 781 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Zc3hav1Q3UPF5 946 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pcbp2Q61990 362 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Rps27lQ6ZWY3 84 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Trnau1apQ80VC6 287 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Kyat1Q8BTY1 424 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Map2k7Q8CE90 535 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Pcdhb8Q91XZ2 779 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 DguokQ9QX60 277 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Polr2aP08775 1970 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 SmoktcrA2KF29 484 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 4930455H04RikD3Z622 58 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Slc32a1O35633 525 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 P01668 110 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Hoxd8P23463 289 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ptpn5P54830 541 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Hoxd13P70217 339 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Rbm15Q0VBL3 962 aaKnown RBP8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ifit3Q64345 403 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Ubtd2Q6PGH0 234 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Dalrd3Q6PJN8 538 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gxylt2Q810K9 444 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Zcchc4Q8BKW4 512 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Irak3Q8K4B2 609 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Trim31Q8R0K2 507 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Fuca1Q99LJ1 452 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Nck1Q99M51 377 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Atoh8Q99NA2 322 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 2310003L06RikQ9CV82 495 aa8.34□□□□□ -1.07
Sf3b1-201ENSMUST00000027127 Gm28897A0A087WP44 222 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Igkv17-121A0A0G2JFA8 117 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm35911A0A1D5RLS7 214 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmn2r85G3UW56 850 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Sult3a1O35403 293 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 SqleP52019 572 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CtscP97821 462 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rad51Q08297 339 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ermp1Q3UVK0 898 aaKnown RBP8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 B3gnt3Q5JCS9 372 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 GstcdQ5RL51 634 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Crhr2Q60748 411 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rps9Q6ZWN5 194 aaKnown RBP8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ppp1r1cQ8BKK4 108 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slc9a7Q8BLV3 726 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zbtb33Q8BN78 671 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ifnl3Q8CGK6 193 aa8.34□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms