RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Dna2Q6ZQJ5 1062 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zbtb6Q8K088 423 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr806Q8VFI2 313 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ptbp2Q91Z31 531 aaKnown RBP15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fastkd2Q922E6 689 aaKnown RBP15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rnf181Q9CY62 165 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Limk2O54785 638 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cnih3Q6ZWS4 160 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Efr3aQ8BG67 819 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 TiprlQ8BH58 271 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vrk2Q8BN21 503 aaKnown RBP15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Csnk1g1Q8BTH8 459 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Plekhn1Q8C886 359 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ftsj1Q8CBC7 324 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Snx5Q9D8U8 404 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Wdr12Q9JJA4 423 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ism1A2ATD1 454 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Galnt3P70419 633 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pla2g4dQ50L43 825 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 IspdQ5RJG7 447 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Fnip1Q68FD7 1165 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tmem151bQ68FE7 561 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Klhl26Q8BGY4 606 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Fam210aQ8BGY7 273 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lpcat2Q8BYI6 544 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 Klhl25Q8R2P1 589 aa15.96■□□□□ 0.14
Trim28-201ENSMUST00000005705 1700001O22RikA2APZ1 375 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr1153A2AVC0 318 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 4930558K02RikE0CXC6 182 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kifc3O35231 824 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Itm2bO89051 266 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pcmt1P23506 227 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pdha2P35487 391 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vps26aP40336 327 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vbp1P61759 196 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 PamP97467 979 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zmym5Q3U2E2 627 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Q6P2K3 674 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 MfrpQ8K480 584 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 IlkapQ8R0F6 392 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zcchc9Q8R1J3 271 aaKnown RBP15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tgm1Q9JLF6 815 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Syt5Q9R0N5 386 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Htra1Q9R118 480 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Supt3B0QZW4 406 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zfp563B8JJZ9 448 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 MndalD0QMC3 538 aaKnown RBP15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Spaca6E9Q8Q8 339 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Stx7O70439 261 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zfp14P10755 501 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 UcmaQ14BU0 138 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mocs1Q5RKZ7 636 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Stard13Q923Q2 1113 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 NgrnQ99KS2 293 aaKnown RBP15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Fars2Q99M01 451 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mrpl1Q99N96 336 aaKnown RBP15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Atp13a2Q9CTG6 1169 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 PacrglQ9D3X5 248 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Dock1Q8BUR4 1865 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Brca2P97929 3329 aa15.95■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lgr4A2ARI4 951 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zfp39Q02525 718 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ap5b1Q3TAP4 876 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 D13Ertd608eQ3UPR8 151 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr834Q7TRG8 312 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kirrel1Q80W68 789 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hyal5Q812F3 526 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Nod1Q8BHB0 953 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Prpf18Q8BM39 342 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zc2hc1cQ8CCG1 527 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Fate1Q8CEK7 99 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 4932414N04RikQ8CEQ9 752 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 BroxQ8K2Q7 411 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 LzicQ8K3C3 190 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ces2aQ8QZR3 558 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr1019Q8VGS3 310 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Barhl2Q8VIB5 384 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Sdcbp2Q99JZ0 292 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ergic3Q9CQE7 383 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ndufaf4Q9D1H6 173 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 SqorQ9R112 450 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Psma4Q9R1P0 261 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Trpm7Q923J1 1863 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm14781A2A9Q9 366 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 S100zB9EJL3 99 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hk2O08528 917 aaKnown RBP15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mageb5Q14AN0 366 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Rsrp1Q3UC65 298 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc22a15Q504N2 544 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Satb1Q60611 764 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Sephs1Q8BH69 392 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm6377Q8BHV4 303 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Cdh7Q8BM92 785 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gpat3Q8C0N2 438 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Wdr37Q8CBE3 496 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ints10Q8K2A7 710 aaKnown RBP15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr697Q8VFM4 317 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Nprl3Q8VIJ8 569 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Nos1apQ9D3A8 503 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kbtbd12Q9D618 625 aa15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms