RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PIK3CGP48736 1102 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 GATMP50440 423 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 ALDH3A2P51648 485 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 CLCN7P51798 805 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 KPNA1P52294 538 aaPredicted RBP16.23■□□□□ 0.19
LIG1-206ENST00000594067 CRHR2Q13324 411 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 BFSP2Q13515 415 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 DAG1Q14118 895 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 IGFN1Q86VF2 1251 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 FIG4Q92562 907 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.23■□□□□ 0.19
LIG1-206ENST00000594067 DNMT3LQ9UJW3 386 aa16.23■□□□□ 0.19
LIG1-206ENST00000594067 NT5C1B-RDH14C9J2C7 533 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 DFNA5O60443 496 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 DEAF1O75398 565 aaPredicted RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 GUCA1CO95843 209 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 CKBP12277 381 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 CRHBPP24387 322 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ATP5C1P36542 298 aaKnown RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 HALP42357 657 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 SLC11A2P49281 568 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 IST1P53990 364 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 GPR17Q13304 367 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 PWP1Q13610 501 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 GTF2H2Q13888 395 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 FAM98BQ52LJ0 330 aaKnown RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 GTF2H2CQ6P1K8 395 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 TTC30BQ8N4P2 665 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 FBXO30Q8TB52 745 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 SLC35B4Q969S0 331 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 SPATA17Q96L03 361 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ING2Q9H160 280 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 VWA8A3KMH1 1905 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ANKRD28O15084 1053 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 PRAMEF12O95522 483 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ALPLP05186 524 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 RAP2AP10114 183 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ATF6P18850 670 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 GGT1P19440 569 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 MTHFRP42898 656 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 CLCN4P51793 760 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 PLA2G16P53816 162 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 CHRNB3Q05901 458 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 CRY1Q16526 586 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ZNF583Q96ND8 569 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ADGRE3Q9BY15 652 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 IPPKQ9H8X2 491 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 LTB4R2Q9NPC1 389 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 GKN1Q9NS71 199 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 VAPAQ9P0L0 249 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 NEUROG3Q9Y4Z2 214 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ST14Q9Y5Y6 855 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 GBF1Q92538 1859 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ARNTLO00327 626 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 TULP3O75386 442 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 PRSS23O95084 383 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 ESR1P03372 595 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 THRBP10828 461 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 SLC2A4P14672 509 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 PTGER3P43115 390 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 HSPA7P48741 367 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 FLT3LGP49771 235 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 RPL38P63173 70 aaKnown RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 ZNF177Q13360 481 aaPredicted RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 PTGR1Q14914 329 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 RTP2Q5QGT7 225 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 RNF219Q5W0B1 726 aaPredicted RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 ENPP6Q6UWR7 440 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 R3HCC1LQ7Z5L2 792 aaKnown RBP16.22■□□□□ 0.19
LIG1-206ENST00000594067 SPARTQ8N0X7 666 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 SLC22A17Q8WUG5 538 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 FKBP10Q96AY3 582 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 NRBF2Q96F24 287 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 COMMD8Q9NX08 183 aa16.22■□□□□ 0.19
LIG1-206ENST00000594067 CLDN11O75508 207 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 KLKB1P03952 638 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 IRF1P10914 325 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 CD9P21926 228 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 GSTM2P28161 218 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 TWF1Q12792 350 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 PCBP2Q15366 365 aaKnown RBP eCLIP16.21■□□□□ 0.199e-7■■■■□ 26
LIG1-206ENST00000594067 CCSAPQ6IQ19 270 aaPredicted RBP16.21■□□□□ 0.19
LIG1-206ENST00000594067 SBSNQ6UWP8 590 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 THAP5Q7Z6K1 395 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 MILR1Q7Z6M3 343 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 ABHD11Q8NFV4 315 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 ITPKCQ96DU7 683 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 P2RY12Q9H244 342 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 ADNPQ9H2P0 1102 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 NSUN3Q9H649 340 aaKnown RBP16.21■□□□□ 0.19
LIG1-206ENST00000594067 SMURF2Q9HAU4 748 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 UTS2RQ9UKP6 389 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 DHRS7Q9Y394 339 aa16.21■□□□□ 0.19
LIG1-206ENST00000594067 FFAR3O14843 346 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 GSTA4O15217 222 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 GPR42O15529 346 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 GMNNO75496 209 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 CTPS1P17812 591 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms