RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 BTRCQ9Y297 605 aa6.45□□□□□ -1.38
SLIRP-203ENST00000554074 REXO2Q9Y3B8 237 aaKnown RBP6.45□□□□□ -1.38
SLIRP-203ENST00000554074 KCNMB2Q9Y691 235 aa6.45□□□□□ -1.38
SLIRP-203ENST00000554074 COLEC10Q9Y6Z7 277 aa6.45□□□□□ -1.38
SLIRP-203ENST00000554074 LRRK2Q5S007 2527 aa6.45□□□□□ -1.38
SLIRP-203ENST00000554074 MDC1Q14676 2089 aaKnown RBP6.45□□□□□ -1.38
SLIRP-203ENST00000554074 SPTBN1Q01082 2364 aaKnown RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 HECTD1Q9ULT8 2610 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 MACROD2A1Z1Q3 448 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 GRID2IPA4D2P6 1211 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 GOLGA6L9A6NEM1 432 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 MIF4GDA9UHW6 222 aaKnown RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 F5H423 210 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 MKRN2OSH3BPM6 223 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PSMD3O43242 534 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 LDB2O43679 373 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 CPNE3O75131 537 aaKnown RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 CREG1O75629 220 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 CCDC175P0C221 793 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 ATP1B2P14415 290 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 FOLR1P15328 257 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PBLDP30039 288 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 CD151P48509 253 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 ARL4DP49703 201 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PMS2P54278 862 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TUBB4BP68371 445 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TLE1Q04724 770 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 RPA4Q13156 261 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 KLF1Q13351 362 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 DNASE1L3Q13609 305 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TUBB2AQ13885 445 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PTPRCAPQ14761 206 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PARP6Q2NL67 630 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 DEFB109BQ30KR1 87 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 P3H1Q32P28 736 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF658BQ4V348 819 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 LACTB2Q53H82 288 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 DNTTIP2Q5QJE6 756 aaKnown RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TMTC4Q5T4D3 741 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PWWP2BQ6NUJ5 590 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TCTN3Q6NUS6 607 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 ARMC6Q6NXE6 501 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 C16orf46Q6P387 395 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 DARS2Q6PI48 645 aaKnown RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 RAD9BQ6WBX8 426 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 SYVN1Q86TM6 617 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 APLFQ8IW19 511 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 SYCE1Q8N0S2 351 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 ACVR1CQ8NER5 493 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 OR13C4Q8NGS5 318 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 CCDC110Q8TBZ0 833 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 ABHD17AQ96GS6 310 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 RMDN2Q96LZ7 410 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TUBB2BQ9BVA1 445 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 LACRTQ9GZZ8 138 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 TFB2MQ9H5Q4 396 aaKnown RBP6.44□□□□□ -1.38
SLIRP-203ENST00000554074 C10orf88Q9H8K7 445 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 LRRC40Q9H9A6 602 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 VPS37BQ9H9H4 285 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 C1GALT1Q9NS00 363 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 FGF21Q9NSA1 209 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 AMFRQ9UKV5 643 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 POMT2Q9UKY4 750 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PSMD13Q9UNM6 376 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 COL12A1Q99715 3063 aa6.44□□□□□ -1.38
SLIRP-203ENST00000554074 PRRC2CQ9Y520 2896 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CNTRLQ7Z7A1 2325 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 HIVEP3Q5T1R4 2406 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 UBA6A0AVT1 1052 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 OR6C74A6NCV1 312 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 MROH6A6NGR9 719 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ERI2A8K979 691 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 QSOX1O00391 747 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ZSCAN12O43309 604 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 RFPL1O75677 317 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 AP2A2O94973 939 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 TIAF1O95411 115 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 EBLN1P0CF75 366 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 MSNP26038 577 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ACRV1P26436 265 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 PTPN4P29074 926 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 MC4RP32245 332 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 KPNA2P52292 529 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 NAP1L1P55209 391 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 FOXK1P85037 733 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CCZ1BP86790 482 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CCZ1P86791 482 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CACNG1Q06432 222 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 KLRB1Q12918 225 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 PRKAA1Q13131 559 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 OLIG2Q13516 323 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 LAMB3Q13751 1172 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ERV3-1Q14264 604 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 KCNAB1Q14722 419 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 UGT8Q16880 541 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ATP1A1-AS1Q5TC04 95 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 IZUMO3Q5VZ72 239 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 DUS1LQ6P1R4 473 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF449Q6P9G9 518 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms