RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 V9GYQ6 96 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 COL1A2P08123 1366 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 FADS2O95864 444 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TIMP1P01033 207 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 URODP06132 367 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SOX9P48436 509 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SEMA3BQ13214 749 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ATF7IP2Q5U623 682 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM171BQ6P995 826 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 CMC1Q7Z7K0 106 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 FBXW5Q969U6 566 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SIPA1Q96FS4 1042 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ADAM2Q99965 735 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TRAF4Q9BUZ4 470 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 C14orf119Q9NWQ9 140 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TLR6Q9Y2C9 796 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 INSL6Q9Y581 213 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 NR5A2O00482 541 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 RGS10O43665 173 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 PGLSO95336 258 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TPSB2P20231 275 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 CST5P28325 142 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 OXTRP30559 389 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 MFSD13AQ14CX5 517 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 RPS6KA2Q15349 733 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TPSAB1Q15661 275 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ZBTB37Q5TC79 503 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 LIX1LQ8IVB5 337 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TDHQ8IZJ6 230 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ARNTL2Q8WYA1 636 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SIGLEC10Q96LC7 697 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TEKT5Q96M29 485 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 GTPBP2Q9BX10 602 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 BBS2Q9BXC9 721 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SAV1Q9H4B6 383 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 GLS2Q9UI32 602 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SMIM35A0A1B0GVV1 85 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 G3V2L1 256 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 LRIG2O94898 1065 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 C1QBP02746 253 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 VTNP04004 478 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TP53P04637 393 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 GMPRP36959 345 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 OR1G1P47890 313 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 NKX3-2P78367 333 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SCN1BQ07699 218 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 CD47Q08722 323 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 MGAT3Q09327 533 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 IL18R1Q13478 541 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 EFR3AQ14156 821 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ZMYND11Q15326 602 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TRIP4Q15650 581 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SYT6Q5T7P8 510 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 GLYATQ6IB77 296 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ENKURQ8TC29 256 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM110BQ8TC76 370 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 UROC1Q96N76 676 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF558Q96NG5 402 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 STRA6Q9BX79 667 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 BAIAP2Q9UQB8 552 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 PRELID3BQ9Y3B1 194 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SYNJ2BP-COX16A0A087WUM0 186 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TISP43B9A030 160 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 AP3D1O14617 1153 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 WDPCPO95876 746 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 FOSL2P15408 326 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 RAB3AP20336 220 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 PCMT1P22061 227 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 KPNA2P52292 529 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 NRLP54845 237 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 CHRNB3Q05901 458 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 RGS1Q08116 209 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SEMA3AQ14563 771 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SETMARQ53H47 684 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 OR6B2Q6IFH4 312 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TIGD7Q6NT04 549 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 CFAP77Q6ZQR2 320 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 THEM5Q8N1Q8 247 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 YIPF7Q8N8F6 280 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 TRNT1Q96Q11 434 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 GDF15Q99988 308 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC30A2Q9BRI3 323 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF416Q9BWM5 594 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP3A43Q9HB55 503 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 COX16Q9P0S2 106 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 STAP1Q9ULZ2 295 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 PCDHGB1Q9Y5G3 927 aa10.72□□□□□ -0.69
CLSTN3-207ENST00000537408 HNRNPCL2B2RXH8 293 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 G3V2T6 193 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 UBXN8O00124 270 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 SDHDO14521 159 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 GMDSO60547 372 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 RGS20O76081 388 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms