RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 DR1Q01658 176 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 DHX9Q08211 1270 aaKnown RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 PRKG2Q13237 762 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 COL28A1Q2UY09 1125 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 WDR74Q6RFH5 385 aaPredicted RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 CLEC14AQ86T13 490 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 ZFAND4Q86XD8 727 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 DENND6AQ8IWF6 608 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 OR5AR1Q8NGP9 310 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SNIP1Q8TAD8 396 aaKnown RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 HEXDCQ8WVB3 486 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SH3KBP1Q96B97 665 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SGSM3Q96HU1 749 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 BIRC8Q96P09 236 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 FERD3LQ96RJ6 166 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 STRADBQ9C0K7 418 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 ZMYND15Q9H091 742 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 STN1Q9H668 368 aaKnown RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 XKR8Q9H6D3 395 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 UCK1Q9HA47 277 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SLC17A6Q9P2U8 582 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SLC24A2Q9UI40 661 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 ACSL5Q9ULC5 683 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 PLAGL1Q9UM63 463 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 RUVBL2Q9Y230 463 aaKnown RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 SDR42E2A6NKP2 422 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 EFCAB7A8K855 629 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 BTN3A3O00478 584 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 NIPSNAP2O75323 286 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 JMJD7P0C870 316 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 MLNP12872 115 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 ACADLP28330 430 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 RBMS1P29558 406 aaKnown RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 CASQ1P31415 396 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 FMO4P31512 558 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 CAPZBP47756 277 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 ITGA8P53708 1063 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 EIF3BP55884 814 aaKnown RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 CTBP1Q13363 440 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 COL9A2Q14055 689 aaPredicted RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 DHX34Q14147 1143 aaKnown RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 TRADDQ15628 312 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 KIAA0930Q6ICG6 404 aaPredicted RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 IRGCQ6NXR0 463 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 IGF2-ASQ6U949 168 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 TMEM135Q86UB9 458 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 SPACA3Q8IXA5 215 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 OTUD6BQ8N6M0 293 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 OR4E2Q8NGC2 313 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 LPGAT1Q92604 370 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 PEX13Q92968 403 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 ART4Q93070 314 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 C9orf72Q96LT7 481 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 ZNF578Q96N58 590 aaPredicted RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 SLC30A3Q99726 388 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 HGH1Q9BTY7 390 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 TSR3Q9UJK0 312 aaKnown RBP13.22□□□□□ -0.29
SNF8-206ENST00000509989 CRYL1Q9Y2S2 319 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 SNX24Q9Y343 169 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 RPS6KL1Q9Y6S9 549 aa13.22□□□□□ -0.29
SNF8-206ENST00000509989 A0A087WV48 116 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 IGHV5-51A0A0C4DH38 117 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 FAM237BA0A1B0GVD1 139 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 UBA6A0AVT1 1052 aaPredicted RBP13.21□□□□□ -0.29
SNF8-206ENST00000509989 OR6C74A6NCV1 312 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 ITGA2BP08514 1039 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 ABCG1P45844 678 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 PGGT1BP53609 377 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 MPP1Q00013 466 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 LAMB3Q13751 1172 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 KCNAB1Q14722 419 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 TYSND1Q2T9J0 566 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 ANKS6Q68DC2 871 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 HIBCHQ6NVY1 386 aaPredicted RBP13.21□□□□□ -0.29
SNF8-206ENST00000509989 ZNF549Q6P9A3 640 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 PDZD3Q86UT5 571 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 FAM129CQ86XR2 697 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 SPATA4Q8NEY3 305 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 OR52E1Q8NGJ3 308 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 MAP3K3Q99759 626 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 KIR3DX1Q9H7L2 352 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 XAB2Q9HCS7 855 aaKnown RBP13.21□□□□□ -0.29
SNF8-206ENST00000509989 FBXO6Q9NRD1 293 aaPredicted RBP13.21□□□□□ -0.29
SNF8-206ENST00000509989 SIDT1Q9NXL6 827 aaKnown RBP13.21□□□□□ -0.29
SNF8-206ENST00000509989 B3GALT1Q9Y5Z6 326 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 MGAQ8IWI9 3026 aa13.21□□□□□ -0.29
SNF8-206ENST00000509989 PCM1Q15154 2024 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 TMX2-CTNND1H3BSU7 103 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 PRMT5O14744 637 aaPredicted RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 EFSO43281 561 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 RAD51CO43502 376 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 GPC4O75487 556 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 S1PR4O95977 384 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 OR56A5P0C7T3 313 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms