RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TBC1D4O60343 1298 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 PRAMEF12O95522 483 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 FGF1P05230 155 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 MAGP20916 626 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 HPCAL1P37235 193 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 IL2P60568 153 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 IL5RAQ01344 420 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 SMN1Q16637 294 aaKnown RBP14□□□□□ -0.17
ERCC3-203ENST00000445889 COQ5Q5HYK3 327 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 SLC16A12Q6ZSM3 486 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 ZNF555Q8NEP9 628 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 GIPC2Q8TF65 315 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 FKBP10Q96AY3 582 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 ACTR8Q9H981 624 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 GPN2Q9H9Y4 310 aaPredicted RBP14□□□□□ -0.17
ERCC3-203ENST00000445889 C8orf4Q9NR00 106 aa14□□□□□ -0.17
ERCC3-203ENST00000445889 PDE4DIPQ5VU43 2346 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 VPS4BO75351 444 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 MYCLP1P12525 358 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-203ENST00000445889 PKMP14618 531 aaKnown RBP13.99□□□□□ -0.17
ERCC3-203ENST00000445889 HLA-DPA1P20036 260 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 GSTM2P28161 218 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 OR1G1P47890 313 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 GP2P55259 537 aaKnown RBP13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SEMG2Q02383 582 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 ACVR1Q04771 509 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SKIV2LQ15477 1246 aaKnown RBP13.99□□□□□ -0.17
ERCC3-203ENST00000445889 LRRC49Q8IUZ0 686 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 CLDN19Q8N6F1 224 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 CD200R1Q8TD46 325 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 HPS1Q92902 700 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 FBXO32Q969P5 355 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SLC47A1Q96FL8 570 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 ALPK1Q96QP1 1244 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 TSPAN18Q96SJ8 248 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 MUC13Q9H3R2 512 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 COMMD8Q9NX08 183 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 MAGEL2Q9UJ55 1249 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 NEUROG3Q9Y4Z2 214 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SNX5Q9Y5X3 404 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SYCE1LA8MT33 242 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 CLDN25C9JDP6 229 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 MLYCDO95822 493 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 JUNBP17275 347 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-203ENST00000445889 GGT1P19440 569 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 IL10RBQ08334 325 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 VAC14Q08AM6 782 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 CRY1Q16526 586 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 PRR23BQ6ZRT6 265 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 FRA10AC1Q70Z53 315 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 DSG4Q86SJ6 1040 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 PSD4Q8NDX1 1056 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 GLMNQ92990 594 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 ZNF347Q96SE7 839 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 FEM1AQ9BSK4 669 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 IPPKQ9H8X2 491 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SLC25A37Q9NYZ2 338 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 ERVK-18Q9QC07 812 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 MTRRQ9UBK8 725 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 SEPT3Q9UH03 358 aa13.99□□□□□ -0.17
ERCC3-203ENST00000445889 LOC100130705A0A1B0GUX0 176 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 C16orf96A6NNT2 1141 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 WASH4PA8MWX3 477 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 CBX4O00257 560 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 LSM1O15116 133 aaKnown RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 VPS26AO75436 327 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 NDST3O95803 873 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 CA5AP35218 305 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 RAPSNQ13702 412 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 MBOAT1Q6ZNC8 495 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 GOLGA7Q7Z5G4 137 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 GALNT7Q86SF2 657 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 LEMD2Q8NC56 503 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 GPR150Q8NGU9 434 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 OR6K2Q8NGY2 324 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 SLC35B4Q969S0 331 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 SEPT5Q99719 369 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 MIR1-1HGQ9H1L0 117 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 TYW5A2RUC4 315 aaKnown RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 KPNA4O00629 521 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 OR7A17O14581 309 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 PRLP01236 227 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 CTPS1P17812 591 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 EPHA2P29317 976 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 HOXD12P35452 270 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 ZNF140P52738 457 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 TUSC3Q13454 348 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 TYSND1Q2T9J0 566 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 C16orf59Q7L2K0 433 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 CADM3Q8N126 398 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 NETO1Q8TDF5 533 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 RPL3LQ92901 407 aaKnown RBP13.98□□□□□ -0.17
ERCC3-203ENST00000445889 TADA1Q96BN2 335 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 BTN2A3PQ96KV6 586 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 NODALQ96S42 347 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 TRIM62Q9BVG3 475 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 CRISPLD1Q9H336 500 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 SMPD4Q9NXE4 827 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 ZIM2Q9NZV7 527 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms