RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NSMCE2Q96MF7 247 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 NACA2Q9H009 215 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 GKN1Q9NS71 199 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 NEUROG3Q9Y4Z2 214 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 REV3LO60673 3130 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 TMX2-CTNND1H3BSU7 103 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 ARNTLO00327 626 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 TSPAN3O60637 253 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 PRAMEF12O95522 483 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 CDH1P12830 882 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 CTNNB1P35222 781 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 YAP1P46937 504 aaKnown RBP13.63□□□□□ -0.23
NEK4-202ENST00000383721 NUP107P57740 925 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 PCBP2Q15366 365 aaKnown RBP eCLIP13.63□□□□□ -0.23
NEK4-202ENST00000383721 RFTN2Q52LD8 501 aaPredicted RBP13.63□□□□□ -0.23
NEK4-202ENST00000383721 RNF219Q5W0B1 726 aaPredicted RBP13.63□□□□□ -0.23
NEK4-202ENST00000383721 TMEM214Q6NUQ4 689 aaKnown RBP13.63□□□□□ -0.23
NEK4-202ENST00000383721 CYP20A1Q6UW02 462 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 SBSNQ6UWP8 590 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 EID2BQ96D98 161 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 BDH2Q9BUT1 245 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 CIDEBQ9UHD4 219 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 MAGEL2Q9UJ55 1249 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 EYSQ5T1H1 3165 aa13.63□□□□□ -0.23
NEK4-202ENST00000383721 DYTNA2CJ06 578 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 COCHO43405 550 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 ATE1O95260 518 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 CNPP09543 421 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 RAB39AQ14964 217 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 NR6A1Q15406 480 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 AARS2Q5JTZ9 985 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 OTUD3Q5T2D3 398 aaPredicted RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 PRSS55Q6UWB4 352 aaPredicted RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 CHST15Q7LFX5 561 aaPredicted RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 CGREF1Q99674 301 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 POLR1BQ9H9Y6 1135 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 DHRS7Q9Y394 339 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 PCDHGA11Q9Y5H2 935 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 COMMD10Q9Y6G5 202 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 ADAM12O43184 909 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 KATNA1O75449 491 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 FGF18O76093 207 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 CORO1AP31146 461 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 BMPR1AP36894 532 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 ABRAXAS2Q15018 415 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 CRY1Q16526 586 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 AP5B1Q2VPB7 878 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 CXorf57Q6NSI4 855 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 NCEH1Q6PIU2 408 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 KCTD8Q6ZWB6 473 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 WBP2Q969T9 261 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 PDLIM5Q96HC4 596 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 CDK5RAP1Q96SZ6 601 aaKnown RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 IL17CQ9P0M4 197 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
NEK4-202ENST00000383721 POLR3HQ9Y535 204 aaPredicted RBP13.62□□□□□ -0.23
NEK4-202ENST00000383721 A0A1B0GVM2 712 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ZNF840PA6NDX5 716 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 STC2O76061 302 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 PRSS23O95084 383 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 EFEMP2O95967 443 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 GTF2H2Q13888 395 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 KIAA0040Q15053 153 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 TBC1D25Q3MII6 688 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 CCNYL2Q5T2Q4 361 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 GTF2H2CQ6P1K8 395 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 FRA10AC1Q70Z53 315 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 AUTS2Q8WXX7 1259 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 TMEM169Q96HH4 297 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 DOK1Q99704 481 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 OSBPL6Q9BZF3 934 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 CCL27Q9Y4X3 112 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 H0YAE9 185 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 H3BMQ9 156 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 TCF3P15923 654 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 DCKP27707 260 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 CA5AP35218 305 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ENTPD1P49961 510 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ARSFP54793 590 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 TRAF3Q13114 568 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 PWP1Q13610 501 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ZIK1Q3SY52 487 aaPredicted RBP13.61□□□□□ -0.23
NEK4-202ENST00000383721 GPR107Q5VW38 600 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 KLHL35Q6PF15 583 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ADAMTSL2Q86TH1 951 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 RNF217Q8TC41 542 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 COG8Q96MW5 612 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 ZNF583Q96ND8 569 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 MUS81Q96NY9 551 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 NSUN3Q9H649 340 aaKnown RBP13.61□□□□□ -0.23
NEK4-202ENST00000383721 IPPKQ9H8X2 491 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 PKD2L2Q9NZM6 624 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms