RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Hm13Q9D8V0 378 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Htr3bQ9JHJ5 437 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Spag4Q9JJF2 443 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rfc2Q9WUK4 349 aaKnown RBP12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 VapaQ9WV55 249 aaKnown RBP12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Katna1Q9WV86 491 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zscan12Q9Z1D7 501 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 1110002E22RikE0CYV9 1786 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 1810010D01RikA0A1L1SR87 51 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mllt3A2AM29 569 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Btnl6A2CG22 539 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Speer4f2E9Q366 295 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 1600015I10RikE9Q745 711 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Spdye4cI6XKQ3 339 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Lhx8O35652 367 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Il1aP01582 270 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Myf6P15375 242 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Nfkb1P25799 971 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 TekQ02858 1122 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Q3KNL4 93 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Nol9Q3TZX8 714 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Foxr1Q3UTB7 268 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Xkr5Q5GH66 676 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ddx51Q6P9R1 639 aaKnown RBP12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ranbp10Q6VN19 620 aaKnown RBP12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfyve1Q810J8 777 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Smndc1Q8BGT7 238 aaKnown RBP12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fndc3aQ8BX90 1198 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Nckap1lQ8K1X4 1134 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr1019Q8VGS3 310 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Frmd4bQ920B0 1035 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Marc1Q9CW42 340 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mrpl45Q9D0Q7 306 aaKnown RBP12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Igkv10-94A0A075B5L1 115 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gm28363A0A087WQW2 129 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ttc23lA6H6E9 458 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fam124aD3Z5V4 536 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 2210016F16RikG3X8U3 338 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r8L7N472 848 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Aqp1Q02013 269 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Itga2Q62469 1178 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Snx31Q6P8Y7 439 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Wdr91Q7TMQ7 748 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr1310Q8VF85 312 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr1208Q8VG47 308 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Q9D1Z2 194 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Efcab1Q9D3N2 212 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Csnk1dQ9DC28 415 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Oas1eA0A0J9YV76 386 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zscan4eA0A1B0GRE8 505 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Krt1P04104 637 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Esr1P19785 599 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 PthlhP22858 175 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Csf2rbP26955 896 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Hnf1bP27889 558 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 NadkP58058 439 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Slc30a3P97441 388 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp868Q3UTQ6 422 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fam129aQ3UW53 926 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pcdhga7Q6DD96 935 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cacnb2Q8CC27 655 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Nudt13Q8JZU0 352 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 HnrnplQ8R081 586 aaKnown RBP12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Taf12Q8VE65 161 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Chchd4Q8VEA4 139 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rmnd5bQ91YQ7 393 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 CutalQ9D1U5 156 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Xrn2Q9DBR1 951 aaKnown RBP12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gde1Q9JL56 331 aa12.5□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr566A0A1B0GST0 319 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 IsxA1A546 240 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ccdc62E9PVD1 701 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ctla2bP12400 113 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Elk4P41158 430 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Adamts19P59509 1210 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Tuba4aP68368 448 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Abraxas2Q3TCJ1 415 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Krt2Q3TTY5 707 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Spata6Q3U6K5 488 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Trpc1Q61056 793 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Arhgap30Q640N3 1101 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 RimklaQ6PFX8 380 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Arhgap28Q8BN58 729 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Q8CC96 669 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rnf208Q8K0W3 265 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn1r198Q8R263 300 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Aim2Q91VJ1 354 aaKnown RBP12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Neurl2Q9D0S4 285 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Il23aQ9EQ14 196 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cog8Q9JJA2 640 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rai2Q9QVY8 529 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Oaz3Q9R109 243 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Baz2aQ91YE5 1889 aaKnown RBP12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Baz2bA2AUY4 2123 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gm13285B1AYI3 182 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gm13275B1AYI8 182 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp788E9Q980 884 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Socs5O54928 536 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cxcr3O88410 367 aa12.49□□□□□ -0.41
Rnf4-201ENSMUST00000030992 St3gal5O88829 414 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms