Protein–RNA interactions for Protein: A0A1B0GRE8

Zscan4e, Zinc finger and SCAN domain-containing 4E, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zscan4eA0A1B0GRE8 Gm25239-201ENSMUST00000174915 86 ntBASIC37.63■■■■□ 3.61
Zscan4eA0A1B0GRE8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Zscan4eA0A1B0GRE8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Zscan4eA0A1B0GRE8 Gm15042-201ENSMUST00000120212 883 ntBASIC32.83■■■□□ 2.85
Zscan4eA0A1B0GRE8 Gm24109-201ENSMUST00000175489 103 ntBASIC32.62■■■□□ 2.81
Zscan4eA0A1B0GRE8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Zscan4eA0A1B0GRE8 Gm15045-201ENSMUST00000117359 883 ntBASIC32.07■■■□□ 2.72
Zscan4eA0A1B0GRE8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Zscan4eA0A1B0GRE8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Zscan4eA0A1B0GRE8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Zscan4eA0A1B0GRE8 Gm23366-201ENSMUST00000175022 89 ntBASIC31.43■■■□□ 2.62
Zscan4eA0A1B0GRE8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Zscan4eA0A1B0GRE8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zscan4eA0A1B0GRE8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Zscan4eA0A1B0GRE8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Zscan4eA0A1B0GRE8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Zscan4eA0A1B0GRE8 Psd-208ENSMUST00000224556 2034 ntBASIC30.61■■■□□ 2.49
Zscan4eA0A1B0GRE8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.47■■■□□ 2.47
Zscan4eA0A1B0GRE8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Zscan4eA0A1B0GRE8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Zscan4eA0A1B0GRE8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Zscan4eA0A1B0GRE8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.25■■■□□ 2.43
Zscan4eA0A1B0GRE8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Zscan4eA0A1B0GRE8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.16■■■□□ 2.42
Zscan4eA0A1B0GRE8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.16■■■□□ 2.42
Zscan4eA0A1B0GRE8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Zscan4eA0A1B0GRE8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Zscan4eA0A1B0GRE8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Zscan4eA0A1B0GRE8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Zscan4eA0A1B0GRE8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Zscan4eA0A1B0GRE8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
Zscan4eA0A1B0GRE8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Zscan4eA0A1B0GRE8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.73■■■□□ 2.35
Zscan4eA0A1B0GRE8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Zscan4eA0A1B0GRE8 Gm25238-201ENSMUST00000174914 89 ntBASIC29.71■■■□□ 2.35
Zscan4eA0A1B0GRE8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Zscan4eA0A1B0GRE8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.54■■■□□ 2.32
Zscan4eA0A1B0GRE8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Zscan4eA0A1B0GRE8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Zscan4eA0A1B0GRE8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Zscan4eA0A1B0GRE8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
Zscan4eA0A1B0GRE8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Zscan4eA0A1B0GRE8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Zscan4eA0A1B0GRE8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.98■■■□□ 2.23
Zscan4eA0A1B0GRE8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Zscan4eA0A1B0GRE8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Zscan4eA0A1B0GRE8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.96■■■□□ 2.23
Zscan4eA0A1B0GRE8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Zscan4eA0A1B0GRE8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Zscan4eA0A1B0GRE8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.77■■■□□ 2.2
Zscan4eA0A1B0GRE8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Zscan4eA0A1B0GRE8 Gm27325-201ENSMUST00000175467 74 ntBASIC28.74■■■□□ 2.19
Zscan4eA0A1B0GRE8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Zscan4eA0A1B0GRE8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Zscan4eA0A1B0GRE8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Zscan4eA0A1B0GRE8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Zscan4eA0A1B0GRE8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.62■■■□□ 2.17
Zscan4eA0A1B0GRE8 Gm25262-201ENSMUST00000174934 133 ntBASIC28.52■■■□□ 2.16
Zscan4eA0A1B0GRE8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Zscan4eA0A1B0GRE8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.45■■■□□ 2.15
Zscan4eA0A1B0GRE8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Zscan4eA0A1B0GRE8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Zscan4eA0A1B0GRE8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.3■■■□□ 2.12
Zscan4eA0A1B0GRE8 Rab21-202ENSMUST00000218831 843 ntBASIC28.27■■■□□ 2.12
Zscan4eA0A1B0GRE8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.24■■■□□ 2.11
Zscan4eA0A1B0GRE8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Zscan4eA0A1B0GRE8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.21■■■□□ 2.11
Zscan4eA0A1B0GRE8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Zscan4eA0A1B0GRE8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Zscan4eA0A1B0GRE8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Zscan4eA0A1B0GRE8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.04■■■□□ 2.08
Zscan4eA0A1B0GRE8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Zscan4eA0A1B0GRE8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.99■■■□□ 2.07
Zscan4eA0A1B0GRE8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.96■■■□□ 2.07
Zscan4eA0A1B0GRE8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Zscan4eA0A1B0GRE8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Zscan4eA0A1B0GRE8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Zscan4eA0A1B0GRE8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Zscan4eA0A1B0GRE8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Zscan4eA0A1B0GRE8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.88■■■□□ 2.05
Zscan4eA0A1B0GRE8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.87■■■□□ 2.05
Zscan4eA0A1B0GRE8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Zscan4eA0A1B0GRE8 Gm26115-201ENSMUST00000175605 87 ntBASIC27.84■■■□□ 2.05
Zscan4eA0A1B0GRE8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Zscan4eA0A1B0GRE8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Zscan4eA0A1B0GRE8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Zscan4eA0A1B0GRE8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Zscan4eA0A1B0GRE8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Zscan4eA0A1B0GRE8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Zscan4eA0A1B0GRE8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Zscan4eA0A1B0GRE8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Zscan4eA0A1B0GRE8 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.69■■■□□ 2.02
Zscan4eA0A1B0GRE8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.69■■■□□ 2.02
Zscan4eA0A1B0GRE8 Gm8109-201ENSMUST00000194076 746 ntBASIC27.67■■■□□ 2.02
Zscan4eA0A1B0GRE8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Zscan4eA0A1B0GRE8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Zscan4eA0A1B0GRE8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Zscan4eA0A1B0GRE8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Zscan4eA0A1B0GRE8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Zscan4eA0A1B0GRE8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms