RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 MntO08789 591 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 SpnP15702 395 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Pcmt1P23506 227 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Pxmp2P42925 194 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Trappc9Q3U0M1 1148 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 StradaQ3UUJ4 431 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 MlipQ5FW52 269 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Kpna1Q60960 538 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Itga2Q62469 1178 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Ddx51Q6P9R1 639 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Klhl5Q6PFE1 708 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Vtcn1Q7TSP5 283 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Insig1Q8BGI3 259 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Znf473Q8BI67 892 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Zbtb33Q8BN78 671 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Ikzf5Q8BU00 419 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Arhgap12Q8C0D4 838 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Aldh4a1Q8CHT0 562 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Ints10Q8K2A7 710 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr371Q8VGB8 312 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Fig4Q91WF7 907 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Snx2Q9CWK8 519 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Efcab1Q9D3N2 212 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 P33monoxQ9DBN4 303 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 PrebQ9WUQ2 417 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 1700011I03RikE9PYL8 271 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm4847G3X946 537 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 E2f2P56931 443 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr616Q3KPB0 317 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Esrp1Q3US41 680 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 NkaplQ5SZT7 395 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Ifit3Q64345 403 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr538Q7TRT5 310 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 N4bp2l2Q8JZS6 575 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Treml1Q8K558 317 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 IlkapQ8R0F6 392 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr183Q8VFB9 309 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 GhdcQ99J23 532 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Trpd52l3Q9CQ14 231 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Spcs2Q9CYN2 226 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Ms4a4aA0A087WRT7 236 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Sult2a6B2RVI8 285 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm3636E9Q5P1 227 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Itm2bO89051 266 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 SrgnP13609 152 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Kcnj13P86046 360 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 BegainQ68EF6 600 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Magee1Q6PCZ4 918 aaKnown RBP16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Wipi2Q80W47 445 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Chst2Q80WV3 530 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Prickle2Q80Y24 845 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Cars2Q8BYM8 551 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Fam126bQ8C729 530 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Ugt2b1Q8R084 529 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Slc39a5Q9D856 535 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Prl5a1Q9JII2 230 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Pin1Q9QUR7 165 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 SqorQ9R112 450 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Gbf1Q6DFZ1 1861 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Man1b1A2AJ15 658 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Lgr4A2ARI4 951 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Baz2bA2AUY4 2123 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm6569D3YTM9 175 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Cdh18E9Q9Q6 790 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm3642K7N6V4 267 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm8011K7N6Y5 207 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Ackr2O08707 378 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Scrg1O88745 98 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 JunP05627 334 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Ccdc153P0C7Q1 202 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Ppm1aP49443 382 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Lsm3P62311 102 aaKnown RBP16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Neurog1P70660 244 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Spata48Q5NC83 441 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 MslnQ61468 625 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 HiraQ61666 1015 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Fgfr3Q61851 801 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Thop1Q8C1A5 687 aaKnown RBP16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Tmem259Q8CIV2 574 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Vmn1r188Q8K3N2 308 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 EedQ921E6 441 aaKnown RBP16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Serpinb11Q9CQV3 388 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Pin4Q9CWW6 131 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Exoc2Q9D4H1 924 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Q9D5Y0 588 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 ScelQ9EQG3 652 aa16.17■□□□□ 0.18
Shh-201ENSMUST00000002708 Alms1Q8K4E0 3251 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr566A0A1B0GST0 319 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Akap17bA2A3V1 959 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Krt83E9Q1Y9 479 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Pold1P52431 1105 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 CidecP56198 239 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Gngt2Q61017 69 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Rasgrp3Q6NZH9 691 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Slc2a12Q8BFW9 622 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Smarcal1Q8BJL0 910 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Ppp1r1cQ8BKK4 108 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 4932411N23RikQ8C0S0 470 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Ago1Q8CJG1 857 aaKnown RBP16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Defb19Q8K3I8 83 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms