RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ACOX3O15254 700 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 C22orf31O95567 290 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MYBP10242 640 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 LPOP22079 712 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CBX2Q14781 532 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZBED6CLQ96FA7 236 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF649Q9BS31 505 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MAT2BQ9NZL9 334 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 IL3P08700 152 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 RAB4AP20338 218 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ACVR2AP27037 513 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF767PQ75MW2 155 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 PGAP1Q75T13 922 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 SLC9B2Q86UD5 537 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 TNS4Q8IZW8 715 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZBTB8BQ8NAP8 495 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 TAS2R8Q9NYW2 309 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CFAP97Q9P2B7 532 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ARID1AO14497 2285 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZSCAN5BA6NJL1 495 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MMP10P09238 476 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 BLMHQ13867 455 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 TIGD6Q17RP2 521 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF181Q2M3W8 571 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 OXER1Q8TDS5 423 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 RXFP2Q8WXD0 754 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MROH8Q9H579 483 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 NOX1Q9Y5S8 564 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 BHMG1C9JSJ3 638 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CYP4F8P98187 520 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ELAC1Q9H777 363 aaKnown RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CDH22Q9UJ99 828 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 FXYD6-FXYD2A0A087WZ82 144 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 AGAP5A6NIR3 686 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF99A8MXY4 864 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CYB5BO43169 146 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 GLI1P08151 1106 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZBED5Q49AG3 693 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ATAD3CQ5T2N8 411 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF627Q7L945 461 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 FAM136AQ96C01 138 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 RAB11FIP5Q9BXF6 653 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 FXYD6Q9H0Q3 95 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 OR6C70A6NIJ9 312 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 HLA-DPB1P04440 258 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 HSD11B1P28845 292 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ACOT1Q86TX2 421 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 OR10H4Q8NGA5 316 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 RHOJQ9H4E5 214 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ASB8Q9H765 288 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 A0A087X0B3 334 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 PRPS2P11908 318 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 KAT2BQ92831 832 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 SSX3Q99909 188 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 SPTBN2O15020 2390 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 A0A0J9YYE9 177 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 C20orf202A1L168 122 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 H0Y858 1186 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 LUMP51884 338 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 COMTD1Q86VU5 262 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 C12orf50Q8NA57 414 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF431Q8TF32 576 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 COPS5Q92905 334 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CCDC32Q9BV29 185 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF282Q9UDV7 671 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 AHCTF1Q8WYP5 2266 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PCM1Q15154 2024 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PRDM15P57071 1507 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ATP6AP2A0A1C7CYW4 349 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 RPS12P25398 132 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SP140Q13342 867 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PTGR1Q14914 329 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ANGEL2Q5VTE6 544 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CERS6Q6ZMG9 384 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CYP4X1Q8N118 509 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ABCB9Q9NP78 766 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TNS3Q68CZ2 1445 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 LOXHD1Q8IVV2 1947 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SLC19A2O60779 497 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SSR2P43308 183 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 DNERQ8NFT8 737 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 OSBPL7Q9BZF2 842 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 GDAP2Q9NXN4 497 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 DAPL1A0PJW8 107 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ENTPD3O75355 529 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SLC35G6P0C7Q6 338 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 GSTM2P28161 218 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CASRP41180 1078 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 FNDC3BQ53EP0 1204 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 GMCL1P1Q8NEA9 526 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ELP5Q8TE02 316 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ARL5BQ96KC2 179 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 MBOAT7Q96N66 472 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 MEPEQ9NQ76 525 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms