RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MGAT5Q09328 741 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 CEP128Q6ZU80 1094 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 C3orf62Q6ZUJ4 267 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 CYS1Q717R9 158 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 GALNT7Q86SF2 657 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 RELL1Q8IUW5 271 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 KRT222Q8N1A0 295 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 CCDC74AQ96AQ1 378 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 WWP1Q9H0M0 922 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 LRIT1Q9P2V4 623 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 RABGEF1Q9UJ41 708 aa20.06■□□□□ 0.8
HMGA2-211ENST00000545998 OR52A4PA6NMU1 304 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 H3BMM5 538 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 LIN7AO14910 233 aaPredicted RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 PPM1DO15297 605 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 SLU7O95391 586 aaKnown RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 PKMP14618 531 aaKnown RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 PNLIPP16233 465 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 XRCC1P18887 633 aaPredicted RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 GABRB3P28472 473 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 RPA4Q13156 261 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 ZNF549Q6P9A3 640 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 ZNF449Q6P9G9 518 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 CNSTQ6PJW8 725 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 NAPRTQ6XQN6 538 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 ZNF438Q7Z4V0 828 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 SLC9B2Q86UD5 537 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 PANX3Q96QZ0 392 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 OR52A5Q9H2C5 316 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 SARS2Q9NP81 518 aaKnown RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 ZNF624Q9P2J8 865 aaPredicted RBP20.05■□□□□ 0.8
HMGA2-211ENST00000545998 CPNE7Q9UBL6 633 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 NFU1Q9UMS0 254 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 WDFY3Q8IZQ1 3526 aa20.05■□□□□ 0.8
HMGA2-211ENST00000545998 TCRBV9S1A1TA0A576 114 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 SLC5A10A0PJK1 596 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 AHSGP02765 367 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 AOAHP28039 575 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 PDHA2P29803 388 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 SLC19A1P41440 591 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 HALP42357 657 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 PREPP48147 710 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 NR1D2Q14995 579 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 RPE65Q16518 533 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 CCDC157Q569K6 752 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 CAPRIN2Q6IMN6 1127 aaKnown RBP20.04■□□□□ 0.8
HMGA2-211ENST00000545998 ZFATQ9P243 1243 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 RHPN2P1A8MT19 583 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 NIPSNAP2O75323 286 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 SLC35G4P0C7Q5 338 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 HHEXQ03014 270 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 BOP1Q14137 746 aaKnown RBP20.04■□□□□ 0.8
HMGA2-211ENST00000545998 BRD3Q15059 726 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 N4BP2L1Q5TBK1 243 aaPredicted RBP20.04■□□□□ 0.8
HMGA2-211ENST00000545998 AVL9Q8NBF6 648 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 SPDYE1Q8NFV5 336 aaPredicted RBP20.04■□□□□ 0.8
HMGA2-211ENST00000545998 RMDN2Q96LZ7 410 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 INSM2Q96T92 566 aaPredicted RBP20.04■□□□□ 0.8
HMGA2-211ENST00000545998 CCDC3Q9BQI4 270 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 SMYD2Q9NRG4 433 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 CDYLQ9Y232 598 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 COMMD10Q9Y6G5 202 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 KNTC1P50748 2209 aa20.04■□□□□ 0.8
HMGA2-211ENST00000545998 GPC4O75487 556 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 SPAG6O75602 509 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 C1QAP02745 245 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 CDK4P11802 303 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 TUBB4BP68371 445 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 PLOD1Q02809 727 aaPredicted RBP20.03■□□□□ 0.8
HMGA2-211ENST00000545998 SYTL3Q4VX76 610 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 SLC26A11Q86WA9 606 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 ASZ1Q8WWH4 475 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 NINJ2Q9NZG7 142 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 MED16Q9Y2X0 877 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 PSAT1Q9Y617 370 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 PTPRBP23467 1997 aa20.03■□□□□ 0.8
HMGA2-211ENST00000545998 ASPMQ8IZT6 3477 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 FAM159BA6NKW6 160 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 MTHFD1P11586 935 aaKnown RBP20.02■□□□□ 0.8
HMGA2-211ENST00000545998 CD151P48509 253 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 E2F1Q01094 437 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 BIRC2Q13490 618 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 KYNUQ16719 465 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 PDZD3Q86UT5 571 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 TRIM48Q8IWZ4 208 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 EIF1ADQ8N9N8 165 aaKnown RBP20.02■□□□□ 0.8
HMGA2-211ENST00000545998 TMEM159Q96B96 161 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 CXorf40BQ96DE9 158 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 C12orf66Q96MD2 445 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 AARSD1Q9BTE6 412 aaKnown RBP20.02■□□□□ 0.8
HMGA2-211ENST00000545998 CCDC68Q9H2F9 335 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 CDC42EP4Q9H3Q1 356 aaKnown RBP20.02■□□□□ 0.8
HMGA2-211ENST00000545998 STN1Q9H668 368 aaKnown RBP20.02■□□□□ 0.8
HMGA2-211ENST00000545998 ANKZF1Q9H8Y5 726 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 SLC40A1Q9NP59 571 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 LATS2Q9NRM7 1088 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 POT1Q9NUX5 634 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 GALPQ9UBC7 116 aa20.02■□□□□ 0.8
HMGA2-211ENST00000545998 CFAP20Q9Y6A4 193 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms