RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 RPS3P23396 243 aaKnown RBP eCLIP19.38■□□□□ 0.69
LIMS2-215ENST00000484252 ARSFP54793 590 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 CHRNB3Q05901 458 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 MAD2L1Q13257 205 aaPredicted RBP19.38■□□□□ 0.69
LIMS2-215ENST00000484252 DAG1Q14118 895 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 INO80DQ53TQ3 878 aaPredicted RBP19.38■□□□□ 0.69
LIMS2-215ENST00000484252 HABP4Q5JVS0 413 aaKnown RBP19.38■□□□□ 0.69
LIMS2-215ENST00000484252 CXorf57Q6NSI4 855 aaKnown RBP19.38■□□□□ 0.69
LIMS2-215ENST00000484252 RDH12Q96NR8 316 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 UGT2B28Q9BY64 529 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 PIF1Q9H611 641 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 GORASP2Q9H8Y8 452 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 POLR1BQ9H9Y6 1135 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 TMEM9Q9P0T7 183 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 ZNHIT2Q9UHR6 403 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 PAIP2BQ9ULR5 123 aaKnown RBP19.38■□□□□ 0.69
LIMS2-215ENST00000484252 PCDHGA11Q9Y5H2 935 aa19.38■□□□□ 0.69
LIMS2-215ENST00000484252 hCG_2014768A0A024R1R8 64 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 IQCF5A8MTL0 148 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 FZD6O60353 706 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 CD160O95971 181 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 ZNF7P17097 686 aaPredicted RBP19.37■□□□□ 0.69
LIMS2-215ENST00000484252 SOX11P35716 441 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 RGS4P49798 205 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 PMS2P3Q13401 168 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 RAB39AQ14964 217 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 PTRHD1Q6GMV3 140 aaKnown RBP19.37■□□□□ 0.69
LIMS2-215ENST00000484252 MILR1Q7Z6M3 343 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 TMEM175Q9BSA9 504 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 GPR63Q9BZJ6 419 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 IPPKQ9H8X2 491 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 NTN4Q9HB63 628 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 LHX3Q9UBR4 397 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 FAF1Q9UNN5 650 aaPredicted RBP19.37■□□□□ 0.69
LIMS2-215ENST00000484252 EIF3LQ9Y262 564 aaKnown RBP19.37■□□□□ 0.69
LIMS2-215ENST00000484252 WDR37Q9Y2I8 494 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 AP3M1Q9Y2T2 418 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 POLR3HQ9Y535 204 aaPredicted RBP19.37■□□□□ 0.69
LIMS2-215ENST00000484252 RGS14O43566 566 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 MT-ND1P03886 318 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 HMGCLP35914 325 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 MTPNP58546 118 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 TWF1Q12792 350 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 TRAF3Q13114 568 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 TMED1Q13445 227 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 KIAA0040Q15053 153 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 TBPL2Q6SJ96 375 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 KCTD8Q6ZWB6 473 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 C19orf43Q9BQ61 176 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 CLPBQ9H078 707 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 CDC14AQ9UNH5 594 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 OARD1Q9Y530 152 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 V9GYQ6 96 aa19.37■□□□□ 0.69
LIMS2-215ENST00000484252 UPK1AO00322 258 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 SLC28A1O00337 649 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 CNPP09543 421 aaKnown RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 CTBSQ01459 385 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 SELPLGQ14242 412 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 ABRAXAS2Q15018 415 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 PYCR3Q53H96 274 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 C1QTNF12Q5T7M4 302 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 ZNF773Q6PK81 442 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 C16orf59Q7L2K0 433 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 GLB1L3Q8NCI6 653 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 ABTB1Q969K4 478 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 C17orf80Q9BSJ5 609 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 FAM126AQ9BYI3 521 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 SMPD4Q9NXE4 827 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 GNPTGQ9UJJ9 305 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 CCL27Q9Y4X3 112 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 TSPAN3O60637 253 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 CPNE6O95741 557 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 THRBP10828 461 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 AKT1P31749 480 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 DGKQP52824 942 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 GRSF1Q12849 480 aaKnown RBP eCLIP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 CBX3Q13185 183 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 RFTN2Q52LD8 501 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 METTL2BQ6P1Q9 378 aaKnown RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 FBXO22Q8NEZ5 403 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 SLC13A3Q8WWT9 602 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 TMBIM1Q969X1 311 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 ZNF583Q96ND8 569 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 SH3GL1Q99961 368 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 TRPM5Q9NZQ8 1165 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 IFT80Q9P2H3 777 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-215ENST00000484252 PCDHB9Q9Y5E1 797 aa19.36■□□□□ 0.69
LIMS2-215ENST00000484252 TRIM64BA6NI03 449 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 TMEM88BA6NKF7 163 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 H3BMQ9 156 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 NOL3O60936 208 aaKnown RBP19.35■□□□□ 0.69
LIMS2-215ENST00000484252 WDR47O94967 919 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 ALPLP05186 524 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 GALTP07902 379 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 SLC2A4P14672 509 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 JUNBP17275 347 aaPredicted RBP19.35■□□□□ 0.69
LIMS2-215ENST00000484252 DGKAP23743 735 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 RAB15P59190 212 aa19.35■□□□□ 0.69
LIMS2-215ENST00000484252 RHOAP61586 193 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms