RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SEMA6AQ9H2E6 1030 aa4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 GAREM1Q9H706 876 aa4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 CNOT10Q9H9A5 744 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 MBNL1Q9NR56 388 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 PRMT7Q9NVM4 692 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 DPP3Q9NY33 737 aa4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 KLHL9Q9P2J3 617 aa4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 SLC24A2Q9UI40 661 aa4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 POU2F3Q9UKI9 436 aa4.21□□□□□ -1.74
CDC42BPA-211ENST00000466538 TAF1P21675 1872 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 A0A0G2JPF8 293 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 ELOVL7A1L3X0 281 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 PRR32B1ATL7 298 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 HNRNPCL3B7ZW38 293 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 LDB3O75112 727 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 TOMM70O94826 608 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 RPN1P04843 607 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR2T7P0C7T2 308 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 HNRNPCL4P0DMR1 293 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 FDPSP14324 419 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 TCEA1P23193 301 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 DNASE1P24855 282 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 HOXC8P31273 242 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 GABRA5P31644 462 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 GP5P40197 560 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 IL15P40933 162 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 IRX6P78412 446 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 KIF5AQ12840 1032 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 PPIGQ13427 754 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 SCARB2Q14108 478 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 SF3B4Q15427 424 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 CREB3L2Q70SY1 520 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 DET1Q7L5Y6 550 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 ADCK2Q7Z695 626 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 CENPVQ7Z7K6 275 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 SATL1Q86VE3 508 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 SFR1Q86XK3 245 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF595Q8IYB9 648 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 GBGT1Q8N5D6 347 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 CAMKVQ8NCB2 501 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 LNX1Q8TBB1 728 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 SIPA1Q96FS4 1042 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 ABHD8Q96I13 439 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 ADGRG7Q96K78 797 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 LYZL4Q96KX0 146 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 DUX5Q96PT3 197 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 NPAP1Q9NZP6 1156 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF112Q9UJU3 913 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 DLGAP4Q9Y2H0 992 aa4.2□□□□□ -1.74
CDC42BPA-211ENST00000466538 MED19A0JLT2 244 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 CCDC188H7C350 402 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 EIF3DO15371 548 aaKnown RBP eCLIP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 INSIG1O15503 277 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 XRCC3O43542 346 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 WDR1O75083 606 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 WISP2O76076 250 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ALPLP05186 524 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 AHRP35869 848 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 CCR10P46092 362 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 DSCR9P59020 149 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ISL1P61371 349 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 RBP5P82980 135 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 RELQ04864 619 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 PRKCZQ05513 592 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 RUNX1T1Q06455 604 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 BFSP1Q12934 665 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 PLA2G7Q13093 441 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 SNTA1Q13424 505 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF273Q14593 569 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 VWC2Q2TAL6 325 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 KRT39Q6A163 491 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 KLC3Q6P597 504 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 C11orf88Q6PI97 169 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 LINGO4Q6UY18 593 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 SPATA2LQ8IUW3 424 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ODF3L1Q8IXM7 274 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 DCP1BQ8IZD4 617 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 SMRP1Q8NCR6 262 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 LILRB1Q8NHL6 650 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 SETD6Q8TBK2 473 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 DEPDC1BQ8WUY9 529 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 MRPS27Q92552 414 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 NEUROG1Q92886 237 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 SECISBP2LQ93073 1101 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 FAM162AQ96A26 154 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF479Q96JC4 524 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 OLFM1Q99784 485 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZPBPQ9BS86 351 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 BTBD10Q9BSF8 475 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 LMF2Q9BU23 707 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 ST6GALNAC4Q9H4F1 302 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 SLA2Q9H6Q3 261 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 EBF2Q9HAK2 575 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 KLHL1Q9NR64 748 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 GTF3C4Q9UKN8 822 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 KCNS2Q9ULS6 477 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR2W1Q9Y3N9 320 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 LIPGQ9Y5X9 500 aa4.19□□□□□ -1.74
CDC42BPA-211ENST00000466538 EVPLQ92817 2033 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms