RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PMS2P3Q13401 168 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PTGR1Q14914 329 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 NEDD8Q15843 81 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 FAM98BQ52LJ0 330 aaKnown RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 ADGRF1Q5T601 910 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 DNAJC14Q6Y2X3 702 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 PRR23BQ6ZRT6 265 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 CARNMT1Q8N4J0 409 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PAF1Q8N7H5 531 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 BCL7CQ8WUZ0 217 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 WBP2Q969T9 261 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ZIC5Q96T25 663 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 EGFL8Q99944 293 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 CIPCQ9C0C6 399 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 SMPD4Q9NXE4 827 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 LHX3Q9UBR4 397 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 ST14Q9Y5Y6 855 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PIKFYVEQ9Y2I7 2098 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 H0Y626 953 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 FFAR3O14843 346 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ANKRD28O15084 1053 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 GPR42O15529 346 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 PFDN1O60925 122 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 KCNH1O95259 989 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CD160O95971 181 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 RAP2AP10114 183 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 COL6A1P12109 1028 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 SLC2A4P14672 509 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 ARSFP54793 590 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CAP1Q01518 475 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 PWP1Q13610 501 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CRY1Q16526 586 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 GPR107Q5VW38 600 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 KCTD8Q6ZWB6 473 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 USP51Q70EK9 711 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 MILR1Q7Z6M3 343 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 SERPINA9Q86WD7 417 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 RIMKLAQ8IXN7 391 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CLEC4FQ8N1N0 589 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 PDPRQ8NCN5 879 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 DBF4BQ8NFT6 615 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 OR6K2Q8NGY2 324 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 SLC13A3Q8WWT9 602 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 FIG4Q92562 907 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 GFM2Q969S9 779 aaKnown RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 TMBIM1Q969X1 311 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 EID2BQ96D98 161 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 MYO19Q96H55 970 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 PPP3R2Q96LZ3 170 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ZBTB18Q99592 522 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 BOCQ9BWV1 1114 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 TM6SF2Q9BZW4 377 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 HIPK3Q9H422 1215 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 CIDEBQ9UHD4 219 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 NEUROG3Q9Y4Z2 214 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ANGPTL3Q9Y5C1 460 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 TET1Q8NFU7 2136 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 H0YAE9 185 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 H3BMQ9 156 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 TMX2-CTNND1H3BSU7 103 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ARNTLO00327 626 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 DFNA5O60443 496 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ATE1O95260 518 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 GALTP07902 379 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ZNF7P17097 686 aaPredicted RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 GGT1P19440 569 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 EEF1B2P24534 225 aaKnown RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 ELK4P28324 431 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 TTKP33981 857 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 OR1D2P34982 312 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 HMGCLP35914 325 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 MTHFRP42898 656 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 RGS4P49798 205 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ALDH3A2P51648 485 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ADARB1P78563 741 aaKnown RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 CHRNB3Q05901 458 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 PLD1Q13393 1074 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 TMED1Q13445 227 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 DAG1Q14118 895 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CCNYL2Q5T2Q4 361 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 DHRS4L2Q6PKH6 230 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CERS6Q6ZMG9 384 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 TMEM26Q6ZUK4 368 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 STK32CQ86UX6 486 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 CLDN19Q8N6F1 224 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 LEMD2Q8NC56 503 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 OR2T12Q8NG77 320 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 LKAAEAR1Q8TD35 194 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 BHMTQ93088 406 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 PDLIM5Q96HC4 596 aaKnown RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 COG8Q96MW5 612 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ING2Q9H160 280 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ELAC1Q9H777 363 aaKnown RBP8.45□□□□□ -1.06
RFX3-202ENST00000358730 NTN4Q9HB63 628 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 ELOVL2Q9NXB9 296 aa8.45□□□□□ -1.06
RFX3-202ENST00000358730 WWOXQ9NZC7 414 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms