RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LCP1P13796 627 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ANPEPP15144 967 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 KCNE1P15382 129 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ATP6V1B2P21281 511 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CD72P21854 359 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 UGT2B10P36537 528 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TAS2R31P59538 309 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MANEAQ5SRI9 462 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CHERPQ8IWX8 916 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 DSELQ8IZU8 1212 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 DENND6BQ8NEG7 585 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PCDHAC2Q9Y5I4 1007 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ZFC3H1O60293 1989 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 FAM172BPA6NC97 362 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 UBFD1O14562 309 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 CILPO75339 1184 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 VEGFAP15692 232 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 NFKB2Q00653 900 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TRIM32Q13049 653 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TAF1CQ15572 869 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 GPR162Q16538 588 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SLC5A9Q2M3M2 681 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 GPAT3Q53EU6 434 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RAB43Q86YS6 212 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 OR8D1Q8WZ84 308 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TOR1AO14656 332 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 STK16O75716 305 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MATN4O95460 622 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NFATC1O95644 943 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MIPP30301 263 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ACSL1P33121 698 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ABATP80404 500 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RPA4Q13156 261 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 HS6ST2Q96MM7 605 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SYT15Q9BQS2 421 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SEC14L3Q9UDX4 400 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TFECO14948 347 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 BPGMP07738 259 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 COX4I1P13073 169 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 JUNDP17535 347 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TAGLN2P37802 199 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 YAP1P46937 504 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 CCT3P49368 545 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 PIGGQ5H8A4 983 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ZNF618Q5T7W0 954 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 HLA-DQA1Q5Y7H0 255 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 FAM117BQ6P1L5 589 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 OR4A15Q8NGL6 344 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RTP4Q96DX8 246 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MCM8Q9UJA3 840 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NOP16Q9Y3C1 178 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 TREHO43280 583 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MICAL2O94851 1124 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 OAS1P00973 400 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 IGHEP01854 428 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CRTC3Q6UUV7 619 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 IL27RAQ6UWB1 636 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 OR52E6Q96RD3 313 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 FCRL5Q96RD9 977 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 DPYSL5Q9BPU6 564 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 S100A14Q9HCY8 104 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ATPIF1Q9UII2 106 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 IKZF3Q9UKT9 509 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TMA7Q9Y2S6 64 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 A0A096LPI6 279 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 FAM86B1E9PN63 330 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 MRASO14807 208 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 GSC2O15499 205 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 YES1P07947 543 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 FAM86B2P0C5J1 330 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 HMGCS2P54868 508 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 CACNB1Q02641 598 aaPredicted RBP3.96□□□□□ -1.77
USH2A-201ENST00000307340 ILF3Q12906 894 aaKnown RBP eCLIP3.96□□□□□ -1.77
USH2A-201ENST00000307340 EPC2Q52LR7 807 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 WDR59Q6PJI9 974 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 KCTD20Q7Z5Y7 419 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 FAM35AQ86V20 835 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 TMEM175Q9BSA9 504 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 G6PC3Q9BUM1 346 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 NUP214P35658 2090 aaPredicted RBP3.96□□□□□ -1.77
USH2A-201ENST00000307340 A0A1W2PPW3 197 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 EDN1P05305 212 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 LAG3P18627 525 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 GALP22466 123 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 HOXC13P31276 330 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 MIIPQ5JXC2 388 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 ZNF470Q6ECI4 717 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 INTS5Q6P9B9 1019 aaKnown RBP3.96□□□□□ -1.77
USH2A-201ENST00000307340 MS4A15Q8N5U1 240 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 SHDQ96IW2 340 aa3.96□□□□□ -1.77
USH2A-201ENST00000307340 E9PBE3 544 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 UNGP13051 313 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 ADIGQ0VDE8 80 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TSTA3Q13630 321 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PDK3Q15120 406 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AP5B1Q2VPB7 878 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PLEKHG4Q58EX7 1191 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 RBM12BQ8IXT5 1001 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 OR2T12Q8NG77 320 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CCNL2Q96S94 520 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms