RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Efemp1Q8BPB5 493 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tmed10Q9D1D4 219 aaKnown RBP13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Hipk3Q9ERH7 1192 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Mia3Q8BI84 1930 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm8334F7CD45 553 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm4847G3X946 537 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Lrig1P70193 1091 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Smad5P97454 465 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Satb1Q60611 764 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Slc36a1Q8K4D3 475 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr1325Q8VF43 315 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Usp3Q91W36 520 aaKnown RBP13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 ProzQ9CQW3 399 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ly6kQ9CWP4 154 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Armc1Q9D7A8 282 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olig2Q9EQW6 323 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 MycsQ9Z304 431 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ttc6G3UYY4 1857 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr292F8VQ84 308 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Oaz2O08608 189 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gpr25P0C5I1 358 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Mthfd2P18155 350 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Srbd1Q497V5 1015 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Rabl6Q5U3K5 725 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ugt2a1Q80X89 528 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Rbm34Q8C5L7 375 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Wdr26Q8C6G8 641 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ppp1r14cQ8R4S0 164 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Epm2aip1Q8VEH5 606 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tm4sf4Q91XD3 202 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 AasdhpptQ9CQF6 309 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 CatsperzQ9CQP8 194 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Dyrk1bQ9Z188 629 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ascc3E9PZJ8 2198 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tcp10cE9Q046 482 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Speer4cG3UXD1 256 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm10354K7N6A0 256 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 TpmtO55060 240 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Dnmt3aO88508 908 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gnpda1O88958 289 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 CremP27699 357 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 BrafP28028 804 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Apobec1P51908 229 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pdx1P52946 284 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ranbp9P69566 653 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 NfycP70353 335 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 StacP97306 403 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Sox17Q61473 419 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Lemd2Q6DVA0 511 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Sec24bQ80ZX0 1251 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 H2-M10.2Q85ZW9 329 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Igsf8Q8R366 611 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Sh3glb2Q8R3V5 400 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Arhgef3Q91X46 524 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pcdhga9Q91XX9 932 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Atp6v1c2Q99L60 427 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tex46Q9CPU3 165 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Agpat5Q9D1E8 365 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 UtrnE9Q6R7 3430 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Xlr5bA2BI50 236 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 C7D3YXF5 845 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ccl26F8VQM2 93 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm14496K7N5U4 849 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Bcl7cO08664 217 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Sox2P48432 319 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Serpinb5P70124 375 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Rab26Q504M8 260 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Foxj1Q61660 421 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Jak3Q62137 1100 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tlr12Q6QNU9 906 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Prpf18Q8BM39 342 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tp53bp2Q8CG79 1128 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm42417Q8K1D0 126 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ccdc92Q8VDN4 314 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Coro6Q920M5 471 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Glipr1l1Q9DAG6 236 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Mrpl46Q9EQI8 283 aa13.06□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Vmn2r-ps130A0A140T8U3 855 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 1700001O22RikA2APZ1 375 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Sec14l5B2RXM5 696 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 5830411N06RikB3F5L4 1112 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 NapsaO09043 419 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Orm2P07361 207 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Esr1P19785 599 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 BgnP28653 369 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 S100a9P31725 113 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 CenpcP49452 906 aaKnown RBP13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gjb5Q02739 271 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ankrd13bQ5F259 626 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 PdgfrlQ6PE55 375 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Cnksr3Q8BMA3 555 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Lrrc17Q9CXD9 443 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Mgrn1Q9D074 532 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 4930578G10RikQ9D4Q4 153 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gtf2h2Q9JIB4 396 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Galk1Q9R0N0 392 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Cdh17Q9R100 827 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm21083A0A0G2JFD5 256 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm3752A6NAT4 150 aa13.05□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pate1E9Q658 125 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms