Protein–RNA interactions for Protein: Q99L60

Atp6v1c2, V-type proton ATPase subunit C 2, mousemouse

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c2Q99L60 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Atp6v1c2Q99L60 Gm25239-201ENSMUST00000174915 86 ntBASIC32.62■■■□□ 2.81
Atp6v1c2Q99L60 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
Atp6v1c2Q99L60 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Atp6v1c2Q99L60 Psd-208ENSMUST00000224556 2034 ntBASIC30.61■■■□□ 2.49
Atp6v1c2Q99L60 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Atp6v1c2Q99L60 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Atp6v1c2Q99L60 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Atp6v1c2Q99L60 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Atp6v1c2Q99L60 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Atp6v1c2Q99L60 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Atp6v1c2Q99L60 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Atp6v1c2Q99L60 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Atp6v1c2Q99L60 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Atp6v1c2Q99L60 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Atp6v1c2Q99L60 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.9■■■□□ 2.22
Atp6v1c2Q99L60 Gm15042-201ENSMUST00000120212 883 ntBASIC28.88■■■□□ 2.21
Atp6v1c2Q99L60 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Atp6v1c2Q99L60 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Atp6v1c2Q99L60 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Atp6v1c2Q99L60 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Atp6v1c2Q99L60 Gm15045-201ENSMUST00000117359 883 ntBASIC28.41■■■□□ 2.14
Atp6v1c2Q99L60 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Atp6v1c2Q99L60 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Atp6v1c2Q99L60 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Atp6v1c2Q99L60 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Atp6v1c2Q99L60 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Atp6v1c2Q99L60 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp6v1c2Q99L60 Gm24109-201ENSMUST00000175489 103 ntBASIC28.08■■■□□ 2.09
Atp6v1c2Q99L60 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.97■■■□□ 2.07
Atp6v1c2Q99L60 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Atp6v1c2Q99L60 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
Atp6v1c2Q99L60 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.9■■■□□ 2.06
Atp6v1c2Q99L60 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Atp6v1c2Q99L60 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.88■■■□□ 2.05
Atp6v1c2Q99L60 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Atp6v1c2Q99L60 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Atp6v1c2Q99L60 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.62■■■□□ 2.01
Atp6v1c2Q99L60 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Atp6v1c2Q99L60 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Atp6v1c2Q99L60 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Atp6v1c2Q99L60 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Atp6v1c2Q99L60 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.52■■■□□ 2
Atp6v1c2Q99L60 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Atp6v1c2Q99L60 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Atp6v1c2Q99L60 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.39■■□□□ 1.98
Atp6v1c2Q99L60 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Atp6v1c2Q99L60 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.35■■□□□ 1.97
Atp6v1c2Q99L60 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atp6v1c2Q99L60 Gm23366-201ENSMUST00000175022 89 ntBASIC27.29■■□□□ 1.96
Atp6v1c2Q99L60 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1c2Q99L60 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Atp6v1c2Q99L60 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Atp6v1c2Q99L60 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Atp6v1c2Q99L60 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Atp6v1c2Q99L60 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Atp6v1c2Q99L60 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Atp6v1c2Q99L60 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Atp6v1c2Q99L60 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Atp6v1c2Q99L60 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Atp6v1c2Q99L60 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Atp6v1c2Q99L60 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Atp6v1c2Q99L60 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Atp6v1c2Q99L60 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.78■■□□□ 1.88
Atp6v1c2Q99L60 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Atp6v1c2Q99L60 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Atp6v1c2Q99L60 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Atp6v1c2Q99L60 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Atp6v1c2Q99L60 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Atp6v1c2Q99L60 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
Atp6v1c2Q99L60 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.55■■□□□ 1.84
Atp6v1c2Q99L60 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atp6v1c2Q99L60 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Atp6v1c2Q99L60 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atp6v1c2Q99L60 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Atp6v1c2Q99L60 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Atp6v1c2Q99L60 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atp6v1c2Q99L60 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Atp6v1c2Q99L60 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atp6v1c2Q99L60 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Atp6v1c2Q99L60 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atp6v1c2Q99L60 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atp6v1c2Q99L60 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp6v1c2Q99L60 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Atp6v1c2Q99L60 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Atp6v1c2Q99L60 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atp6v1c2Q99L60 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atp6v1c2Q99L60 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.04■■□□□ 1.76
Atp6v1c2Q99L60 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Atp6v1c2Q99L60 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atp6v1c2Q99L60 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atp6v1c2Q99L60 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Atp6v1c2Q99L60 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.96■■□□□ 1.75
Atp6v1c2Q99L60 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Atp6v1c2Q99L60 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Atp6v1c2Q99L60 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Atp6v1c2Q99L60 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Atp6v1c2Q99L60 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Atp6v1c2Q99L60 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
Atp6v1c2Q99L60 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms