Protein–RNA interactions for Protein: Q99L60

Atp6v1c2, V-type proton ATPase subunit C 2, mousemouse

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c2Q99L60 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,65■■■□□ 2,82
Atp6v1c2Q99L60 Gm25239-201ENSMUST00000174915 86 ntBASIC32,62■■■□□ 2,81
Atp6v1c2Q99L60 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,48■■■□□ 2,63
Atp6v1c2Q99L60 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,45■■■□□ 2,63
Atp6v1c2Q99L60 Psd-208ENSMUST00000224556 2034 ntBASIC30,61■■■□□ 2,49
Atp6v1c2Q99L60 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Atp6v1c2Q99L60 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,03■■■□□ 2,4
Atp6v1c2Q99L60 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Atp6v1c2Q99L60 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Atp6v1c2Q99L60 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Atp6v1c2Q99L60 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,66■■■□□ 2,34
Atp6v1c2Q99L60 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Atp6v1c2Q99L60 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Atp6v1c2Q99L60 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
Atp6v1c2Q99L60 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Atp6v1c2Q99L60 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,9■■■□□ 2,22
Atp6v1c2Q99L60 Gm15042-201ENSMUST00000120212 883 ntBASIC28,88■■■□□ 2,21
Atp6v1c2Q99L60 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Atp6v1c2Q99L60 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,74■■■□□ 2,19
Atp6v1c2Q99L60 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,59■■■□□ 2,17
Atp6v1c2Q99L60 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Atp6v1c2Q99L60 Gm15045-201ENSMUST00000117359 883 ntBASIC28,41■■■□□ 2,14
Atp6v1c2Q99L60 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,4■■■□□ 2,14
Atp6v1c2Q99L60 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,33■■■□□ 2,13
Atp6v1c2Q99L60 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28,24■■■□□ 2,11
Atp6v1c2Q99L60 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,17■■■□□ 2,1
Atp6v1c2Q99L60 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,11■■■□□ 2,09
Atp6v1c2Q99L60 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,1■■■□□ 2,09
Atp6v1c2Q99L60 Gm24109-201ENSMUST00000175489 103 ntBASIC28,08■■■□□ 2,09
Atp6v1c2Q99L60 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,97■■■□□ 2,07
Atp6v1c2Q99L60 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,96■■■□□ 2,07
Atp6v1c2Q99L60 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,96■■■□□ 2,07
Atp6v1c2Q99L60 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,9■■■□□ 2,06
Atp6v1c2Q99L60 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,89■■■□□ 2,05
Atp6v1c2Q99L60 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,88■■■□□ 2,05
Atp6v1c2Q99L60 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Atp6v1c2Q99L60 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,81■■■□□ 2,04
Atp6v1c2Q99L60 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,62■■■□□ 2,01
Atp6v1c2Q99L60 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,59■■■□□ 2,01
Atp6v1c2Q99L60 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,57■■■□□ 2
Atp6v1c2Q99L60 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,54■■■□□ 2
Atp6v1c2Q99L60 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,53■■■□□ 2
Atp6v1c2Q99L60 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,52■■■□□ 2
Atp6v1c2Q99L60 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,49■■□□□ 1,99
Atp6v1c2Q99L60 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Atp6v1c2Q99L60 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,39■■□□□ 1,98
Atp6v1c2Q99L60 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,36■■□□□ 1,97
Atp6v1c2Q99L60 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,35■■□□□ 1,97
Atp6v1c2Q99L60 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,31■■□□□ 1,96
Atp6v1c2Q99L60 Gm23366-201ENSMUST00000175022 89 ntBASIC27,29■■□□□ 1,96
Atp6v1c2Q99L60 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27,25■■□□□ 1,95
Atp6v1c2Q99L60 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Atp6v1c2Q99L60 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Atp6v1c2Q99L60 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,11■■□□□ 1,93
Atp6v1c2Q99L60 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27,06■■□□□ 1,92
Atp6v1c2Q99L60 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Atp6v1c2Q99L60 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Atp6v1c2Q99L60 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Atp6v1c2Q99L60 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Atp6v1c2Q99L60 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Atp6v1c2Q99L60 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,83■■□□□ 1,89
Atp6v1c2Q99L60 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26,83■■□□□ 1,89
Atp6v1c2Q99L60 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Atp6v1c2Q99L60 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,78■■□□□ 1,88
Atp6v1c2Q99L60 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,77■■□□□ 1,88
Atp6v1c2Q99L60 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Atp6v1c2Q99L60 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Atp6v1c2Q99L60 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,64■■□□□ 1,86
Atp6v1c2Q99L60 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Atp6v1c2Q99L60 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,6■■□□□ 1,85
Atp6v1c2Q99L60 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26,55■■□□□ 1,84
Atp6v1c2Q99L60 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Atp6v1c2Q99L60 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26,52■■□□□ 1,84
Atp6v1c2Q99L60 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,51■■□□□ 1,83
Atp6v1c2Q99L60 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Atp6v1c2Q99L60 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Atp6v1c2Q99L60 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Atp6v1c2Q99L60 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,34■■□□□ 1,81
Atp6v1c2Q99L60 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,31■■□□□ 1,8
Atp6v1c2Q99L60 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,29■■□□□ 1,8
Atp6v1c2Q99L60 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,28■■□□□ 1,8
Atp6v1c2Q99L60 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Atp6v1c2Q99L60 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26,19■■□□□ 1,78
Atp6v1c2Q99L60 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,18■■□□□ 1,78
Atp6v1c2Q99L60 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26,11■■□□□ 1,77
Atp6v1c2Q99L60 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Atp6v1c2Q99L60 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Atp6v1c2Q99L60 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,04■■□□□ 1,76
Atp6v1c2Q99L60 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26,03■■□□□ 1,76
Atp6v1c2Q99L60 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
Atp6v1c2Q99L60 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Atp6v1c2Q99L60 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Atp6v1c2Q99L60 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,96■■□□□ 1,75
Atp6v1c2Q99L60 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Atp6v1c2Q99L60 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,87■■□□□ 1,73
Atp6v1c2Q99L60 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Atp6v1c2Q99L60 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,85■■□□□ 1,73
Atp6v1c2Q99L60 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,84■■□□□ 1,73
Atp6v1c2Q99L60 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25,84■■□□□ 1,73
Atp6v1c2Q99L60 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Retrieved 100 of 76,532 protein–RNA pairs in 10,5 ms