RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.91□□□□□ -0.34
LGR5-202ENST00000536515 NTN4Q9HB63 628 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 POLR3HQ9Y535 204 aaPredicted RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 MAGED1Q9Y5V3 778 aaPredicted RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 ZNF701M0R085 212 aaPredicted RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 PFDN6O15212 129 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 B4GAT1O43505 415 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 RSL1D1O76021 490 aaKnown RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 ALBP02768 609 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 CKBP12277 381 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 ELK4P28324 431 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 TRAF2Q12933 501 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 C16orf72Q14CZ0 275 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 FXNQ16595 210 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 CYP20A1Q6UW02 462 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 FRA10AC1Q70Z53 315 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 RIMKLAQ8IXN7 391 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 DPP10Q8N608 796 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 GFM2Q969S9 779 aaKnown RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 MUS81Q96NY9 551 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 HEBP1Q9NRV9 189 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 IFT80Q9P2H3 777 aaPredicted RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 EVLQ9UI08 416 aaPredicted RBP12.91□□□□□ -0.34
LGR5-202ENST00000536515 MAGEL2Q9UJ55 1249 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 DNMT3LQ9UJW3 386 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 PCDHB3Q9Y5E6 796 aa12.91□□□□□ -0.34
LGR5-202ENST00000536515 A0A1W2PPW3 197 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 SLC38A8A6NNN8 435 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 H0Y858 1186 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 F11P03951 625 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 CDH1P12830 882 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 NFKBIAP25963 317 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 SLC11A2P49281 568 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 GATMP50440 423 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 GPR17Q13304 367 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 C16orf59Q7L2K0 433 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 GOLGA7Q7Z5G4 137 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 OR4F6Q8NGB9 312 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 CCDC97Q96F63 343 aaPredicted RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 SPATA17Q96L03 361 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 CGREF1Q99674 301 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 TLR9Q9NR96 1032 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ZMYM5Q9UJ78 669 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 PCDHGA11Q9Y5H2 935 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 HTTP42858 3142 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 OR7A17O14581 309 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 NPPAP01160 153 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 TCF3P15923 654 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ATF6P18850 670 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 PSMA3P25788 255 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 MAPK10P53779 464 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ABRAXAS2Q15018 415 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 AP5B1Q2VPB7 878 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 RFTN2Q52LD8 501 aaPredicted RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 AARS2Q5JTZ9 985 aaKnown RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 CCNYL2Q5T2Q4 361 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 CCSAPQ6IQ19 270 aaPredicted RBP12.9□□□□□ -0.34
LGR5-202ENST00000536515 ITIH5Q86UX2 942 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 TTC30BQ8N4P2 665 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ITFG1Q8TB96 612 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 TMBIM1Q969X1 311 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 NUDT4Q9NZJ9 180 aa12.9□□□□□ -0.34
LGR5-202ENST00000536515 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.89□□□□□ -0.35
LGR5-202ENST00000536515 UPK1AO00322 258 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 LSM1O15116 133 aaKnown RBP12.89□□□□□ -0.35
LGR5-202ENST00000536515 KLKB1P03952 638 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 ITGB6P18564 788 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 DCKP27707 260 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
LGR5-202ENST00000536515 POLR2IP36954 125 aaKnown RBP12.89□□□□□ -0.35
LGR5-202ENST00000536515 CLCN4P51793 760 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 CLCN7P51798 805 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 ARSFP54793 590 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 ZNF177Q13360 481 aaPredicted RBP12.89□□□□□ -0.35
LGR5-202ENST00000536515 FGD3Q5JSP0 725 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 ELMSAN1Q6PJG2 1045 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 STK32CQ86UX6 486 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 CLEC4FQ8N1N0 589 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 FAM86B1Q8N7N1 296 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 FNDC8Q8TC99 324 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 THAP11Q96EK4 314 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 GKN1Q9NS71 199 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 DFNA5O60443 496 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 DEAF1O75398 565 aaPredicted RBP12.89□□□□□ -0.35
LGR5-202ENST00000536515 CLDN11O75508 207 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 PRAMEF12O95522 483 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 GUCA1CO95843 209 aa12.89□□□□□ -0.35
LGR5-202ENST00000536515 ESR1P03372 595 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms