RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 VIPP01282 170 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 SLC35G4P0C7Q5 338 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 XRCC1P18887 633 aaPredicted RBP20.4■□□□□ 0.86
CCS-207ENST00000531990 GPR3P46089 330 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 INSM1Q01101 510 aaPredicted RBP20.4■□□□□ 0.86
CCS-207ENST00000531990 HHEXQ03014 270 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 PDIA2Q13087 525 aaKnown RBP20.4■□□□□ 0.86
CCS-207ENST00000531990 HES3Q5TGS1 186 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 FAM83HQ6ZRV2 1179 aaPredicted RBP20.4■□□□□ 0.86
CCS-207ENST00000531990 CENPUQ71F23 418 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 ZNF438Q7Z4V0 828 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 LRRC6Q86X45 466 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 LMNTD2Q8IXW0 634 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 Q8N9G6 341 aaPredicted RBP20.4■□□□□ 0.86
CCS-207ENST00000531990 CXorf40BQ96DE9 158 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 CFAP36Q96G28 342 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 CPNE7Q9UBL6 633 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 ZC3H7BQ9UGR2 993 aaKnown RBP20.4■□□□□ 0.86
CCS-207ENST00000531990 PSMD13Q9UNM6 376 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 CHMP2BQ9UQN3 213 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 PRSS21Q9Y6M0 314 aa20.4■□□□□ 0.86
CCS-207ENST00000531990 PPM1DO15297 605 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 TP73O15350 636 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 JUPP14923 745 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 ALDH4A1P30038 563 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 PLTPP55058 493 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 SLC7A5Q01650 507 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 SPIDRQ14159 915 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 TYSND1Q2T9J0 566 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 HP1BP3Q5SSJ5 553 aaPredicted RBP20.39■□□□□ 0.85
CCS-207ENST00000531990 ZNF470Q6ECI4 717 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 PTRHD1Q6GMV3 140 aaKnown RBP20.39■□□□□ 0.85
CCS-207ENST00000531990 TMPRSS7Q7RTY8 843 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 SPRED1Q7Z699 444 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 ELMO1Q92556 727 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 SLC38A3Q99624 504 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 FAM167BQ9BTA0 163 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.39■□□□□ 0.85
CCS-207ENST00000531990 LRRN3Q9H3W5 708 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 COG4Q9H9E3 785 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 GRHL1Q9NZI5 618 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 IL1RAPL1Q9NZN1 696 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 SCHIP1Q9P0W5 487 aaPredicted RBP20.39■□□□□ 0.85
CCS-207ENST00000531990 RABGEF1Q9UJ41 708 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 GNPTGQ9UJJ9 305 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 ANGPTL2Q9UKU9 493 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 CLCA2Q9UQC9 943 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 TEX264Q9Y6I9 313 aa20.39■□□□□ 0.85
CCS-207ENST00000531990 NCOR2Q9Y618 2525 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 RPLP0P05388 317 aaKnown RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 RPS3P23396 243 aaKnown RBP eCLIP20.38■□□□□ 0.85
CCS-207ENST00000531990 PPM1FP49593 454 aaPredicted RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 EIF3BP55884 814 aaKnown RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 RPA4Q13156 261 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 NR1D2Q14995 579 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 GLE1Q53GS7 698 aaKnown RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 KCNMB4Q86W47 210 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 CILP2Q8IUL8 1156 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 ART4Q93070 314 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 GFM1Q96RP9 751 aaKnown RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 SCNM1Q9BWG6 230 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 WWP1Q9H0M0 922 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 EPB41L5Q9HCM4 733 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 POT1Q9NUX5 634 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 INTS10Q9NVR2 710 aaKnown RBP20.38■□□□□ 0.85
CCS-207ENST00000531990 KCNK4Q9NYG8 393 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 WDR37Q9Y2I8 494 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 PCDHB1Q9Y5F3 818 aa20.38■□□□□ 0.85
CCS-207ENST00000531990 OR52A4PA6NMU1 304 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 E7ESA3 106 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 LIN7AO14910 233 aaPredicted RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 EIF3HO15372 352 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCS-207ENST00000531990 TCEA3O75764 348 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 TOP3BO95985 862 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 MT-CO3P00414 261 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 BRAFP15056 766 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 UBE2IP63279 158 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 CCL7P80098 99 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 PLOD1Q02809 727 aaPredicted RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 GUCY2DQ02846 1103 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 CLCA4Q14CN2 919 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 SYTL3Q4VX76 610 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 HSP90AA5PQ58FG0 334 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 DNTTIP2Q5QJE6 756 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 RBM44Q6ZP01 1051 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 ANKMY2Q8IV38 441 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 IGDCC3Q8IVU1 814 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 RBM12BQ8IXT5 1001 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 ZBED8Q8IZ13 594 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 NOA1Q8NC60 698 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 FBXO36Q8NEA4 188 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 DEPDC7Q96QD5 511 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 PANX3Q96QZ0 392 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 CARD6Q9BX69 1037 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 PPANQ9NQ55 473 aaKnown RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 ZNF624Q9P2J8 865 aaPredicted RBP20.37■□□□□ 0.85
CCS-207ENST00000531990 NEUROG3Q9Y4Z2 214 aa20.37■□□□□ 0.85
CCS-207ENST00000531990 H3BMM5 538 aa20.36■□□□□ 0.85
CCS-207ENST00000531990 IFRD1O00458 451 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms