RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TCEA2Q15560 299 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 INAVAQ3KP66 663 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 UAP1L1Q3KQV9 507 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PLA2G4EQ3MJ16 856 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 KBTBD12Q3ZCT8 623 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 EMBQ6PCB8 327 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 STRA8Q7Z7C7 330 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 CNTN4Q8IWV2 1026 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PPM1NQ8N819 430 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PNPLA1Q8N8W4 532 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 OR2I1PQ8NGU4 316 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 UBLCP1Q8WVY7 318 aaPredicted RBP10.13□□□□□ -0.79
SKA1-204ENST00000488454 LPGAT1Q92604 370 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PANX3Q96QZ0 392 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 TCEAL2Q9H3H9 227 aaPredicted RBP10.13□□□□□ -0.79
SKA1-204ENST00000488454 OSGEPL1Q9H4B0 414 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PRM3Q9NNZ6 103 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 KLC4Q9NSK0 619 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 RAB21Q9UL25 225 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 DNAJC16Q9Y2G8 782 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 COMMD10Q9Y6G5 202 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 IKBKGQ9Y6K9 419 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 CSNK1G3Q9Y6M4 447 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 MUC6Q6W4X9 2439 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 DOCK9Q9BZ29 2069 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 C17orf113A0A1B0GUU1 675 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 MGAT4DA6NG13 374 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 FAM159BA6NKW6 160 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 KPNA5O15131 536 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 RIPK2O43353 540 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PCDHGA12O60330 932 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 SNX2O60749 519 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PKMP14618 531 aaKnown RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 ITGB6P18564 788 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 IDSP22304 550 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 TGM1P22735 817 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 EPHA8P29322 1005 aaPredicted RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 ACTR1BP42025 376 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PRLHRP49683 370 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 ACTR1AP61163 376 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 ARHGAP8P85298 464 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 CTBSQ01459 385 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 NAB1Q13506 487 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 KLHL38Q2WGJ6 581 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 GRTP1Q5TC63 336 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 KCTD16Q68DU8 428 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 UGT3A1Q6NUS8 523 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 CNSTQ6PJW8 725 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 SLC30A9Q6PML9 568 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 LVRNQ6Q4G3 990 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 GALNT7Q86SF2 657 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 GATAD2AQ86YP4 633 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 ZNF547Q8IVP9 402 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 CFAP206Q8IYR0 622 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 MEIOBQ8N635 442 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 BEND7Q8N7W2 519 aaPredicted RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 ZNF548Q8NEK5 533 aaPredicted RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 FAM46DQ8NEK8 389 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 OR2L2Q8NH16 312 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 UHMK1Q8TAS1 419 aaKnown RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 GLMNQ92990 594 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 LINC00615Q96LM1 132 aaPredicted RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 CPNE1Q99829 537 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 TIMM29Q9BSF4 260 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 LRRC61Q9BV99 259 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 DUSP23Q9BVJ7 150 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 P2RY12Q9H244 342 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 DPEP2Q9H4A9 486 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 DNAAF2Q9NVR5 837 aaKnown RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PNMA8BQ9ULN7 279 aaPredicted RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 CORO1CQ9ULV4 474 aaPredicted RBP10.12□□□□□ -0.79
SKA1-204ENST00000488454 KCNK6Q9Y257 313 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PCDHGB2Q9Y5G2 931 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PRSS21Q9Y6M0 314 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 LRRK1Q38SD2 2015 aa10.12□□□□□ -0.79
SKA1-204ENST00000488454 PLXNA2O75051 1894 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 C4orf47A7E2U8 309 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 CXorf49A8MYA2 514 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 LMO7DNF2Z398 122 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 CDX4O14627 284 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 YY2O15391 372 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 FFAR2O15552 330 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 APOA4P06727 396 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 INHBAP08476 426 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 ABHD2P08910 425 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SLC2A4P14672 509 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 AK4P27144 223 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 SPRP35270 261 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 GP5P40197 560 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 MSH2P43246 934 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 CLCNKAP51800 687 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SLC12A2P55011 1212 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 RAB15P59190 212 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 PLOD1Q02809 727 aaPredicted RBP10.11□□□□□ -0.79
SKA1-204ENST00000488454 BIRC2Q13490 618 aa10.11□□□□□ -0.79
SKA1-204ENST00000488454 SLC29A2Q14542 456 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms