RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 ILF2Q12905 390 aaKnown RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 BNIP3Q12983 259 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GRIK2Q13002 908 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 EFTUD2Q15029 972 aaKnown RBP eCLIP9.43□□□□□ -0.93e-14■■■■□ 23.3
CD46-214ENST00000480003 RASA2Q15283 850 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CCDC6Q16204 474 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 KLHL38Q2WGJ6 581 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 RBM20Q5T481 1227 aaKnown RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 IL27RAQ6UWB1 636 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 DET1Q7L5Y6 550 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 ASCL5Q7RTU5 278 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 KANSL1Q7Z3B3 1105 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 LRRTM4Q86VH4 590 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 HID1Q8IV36 788 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CTAGE3PQ8IX95 158 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 PHACTR4Q8IZ21 702 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 OXR1Q8N573 874 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 BEND7Q8N7W2 519 aaPredicted RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 OR2L2Q8NH16 312 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 DCAKDQ8WVC6 231 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CCDC77Q9BR77 488 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 TIMM29Q9BSF4 260 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CCM2Q9BSQ5 444 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 TMEM109Q9BVC6 243 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CLPBQ9H078 707 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 TMEM168Q9H0V1 697 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 RHOJQ9H4E5 214 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CARS2Q9HA77 564 aaKnown RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 FSCN3Q9NQT6 498 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 TM7SF3Q9NS93 570 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 KLHL42Q9P2K6 505 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GALPQ9UBC7 116 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 MOSPD1Q9UJG1 213 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 ZNF180Q9UJW8 692 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CORO1CQ9ULV4 474 aaPredicted RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 MTO1Q9Y2Z2 717 aaKnown RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 PRKAB1Q9Y478 270 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GPSM3Q9Y4H4 160 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 COMMD10Q9Y6G5 202 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 USP34Q70CQ2 3546 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 UBA6A0AVT1 1052 aaPredicted RBP9.42□□□□□ -0.9
CD46-214ENST00000480003 SLC5A10A0PJK1 596 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 IQCF5A8MTL0 148 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 H3BMM5 538 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CDX4O14627 284 aaPredicted RBP9.42□□□□□ -0.9
CD46-214ENST00000480003 PIAS2O75928 621 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CFIP05156 583 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 GIMD1P0DJR0 217 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 AOAHP28039 575 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CCR7P32248 378 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
CD46-214ENST00000480003 MSH2P43246 934 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 GNPDA1P46926 289 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CLCN7P51798 805 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 LIMK2P53671 638 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 EIF3BP55884 814 aaKnown RBP9.42□□□□□ -0.9
CD46-214ENST00000480003 SPEM2Q0P670 501 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 GTF2H3Q13889 308 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 LRP8Q14114 963 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CSRP2Q16527 193 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 METRNLQ641Q3 311 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 TCEAL6Q6IPX3 200 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 WASH2PQ6VEQ5 465 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 RD3Q7Z3Z2 195 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 AMZ2Q86W34 360 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 TDRPQ86YL5 185 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 GALNT13Q8IUC8 556 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SDR16C5Q8N3Y7 309 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SLC25A45Q8N413 288 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 DCLK2Q8N568 766 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 ACVR1CQ8NER5 493 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CCL4L1Q8NHW4 92 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 LKAAEAR1Q8TD35 194 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SAP25Q8TEE9 199 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 KCNJ9Q92806 393 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 TCEAL3Q969E4 200 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 VPS39Q96JC1 886 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 OR2M4Q96R27 311 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 GPR22Q99680 433 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 RBBP8Q99708 897 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SLC13A1Q9BZW2 595 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 ROPN1BQ9BZX4 212 aaPredicted RBP9.42□□□□□ -0.9
CD46-214ENST00000480003 GAREM1Q9H706 876 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 ROPN1Q9HAT0 212 aaPredicted RBP9.42□□□□□ -0.9
CD46-214ENST00000480003 IL21RQ9HBE5 538 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 PARD6AQ9NPB6 346 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 WASH6PQ9NQA3 447 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SEMA4GQ9NTN9 838 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 DNAJC28Q9NX36 388 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 EURLQ9NYK6 297 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 SLC24A2Q9UI40 661 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 GNPTGQ9UJJ9 305 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 DHRS7Q9Y394 339 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 CSNK1G3Q9Y6M4 447 aa9.42□□□□□ -0.9
CD46-214ENST00000480003 ARID1BQ8NFD5 2236 aaPredicted RBP9.41□□□□□ -0.9
CD46-214ENST00000480003 PIKFYVEQ9Y2I7 2098 aa9.41□□□□□ -0.9
CD46-214ENST00000480003 EXOC1LA0A1B0GW35 172 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms