RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 MATN3O15232 486 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 PRSS56P0CW18 603 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 ELK4P28324 431 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 LEPRP48357 1165 aaKnown RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 AP2S1P53680 142 aaPredicted RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 COX10Q12887 443 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 SNTA1Q13424 505 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 ACAP2Q15057 778 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 PLA2G4EQ3MJ16 856 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 PM20D1Q6GTS8 502 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 SLC22A9Q8IVM8 553 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 CLYBLQ8N0X4 340 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 PARP8Q8N3A8 854 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 MYLPFQ96A32 169 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 LRRC58Q96CX6 371 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 CENPNQ96H22 339 aaPredicted RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 CNDP2Q96KP4 475 aaKnown RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TBATAQ96M53 351 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 RNF145Q96MT1 663 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 HBEGFQ99075 208 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TUBA1CQ9BQE3 449 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 GPN2Q9H9Y4 310 aaPredicted RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 IL20Q9NYY1 176 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 MTRRQ9UBK8 725 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TSR3Q9UJK0 312 aaKnown RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TTC3P53804 2025 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TEX51A0A1B0GUA7 166 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 FAM155AB1AL88 458 aaPredicted RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 GABRDO14764 452 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 SEMA3DO95025 777 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 MYF6P23409 242 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 ADRA1AP35348 466 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 HTR2BP41595 481 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 SERPINH1P50454 418 aaKnown RBP10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 DSC2Q02487 901 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TNK2Q07912 1038 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TRIM32Q13049 653 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 PPIL2Q13356 520 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 SHEQ5VZ18 495 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 BHLHA9Q7RTU4 235 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 CILP2Q8IUL8 1156 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 CCDC103Q8IW40 242 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 ADGRG5Q8IZF4 528 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 TTLQ8NG68 377 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 OR13J1Q8NGT2 312 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 BLOC1S5Q8TDH9 187 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 NUDT8Q8WV74 236 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 UBXN10Q96LJ8 280 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 C9orf16Q9BUW7 83 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 WDR70Q9NW82 654 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 CPA4Q9UI42 421 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 NUP50Q9UKX7 468 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 FAM50BQ9Y247 325 aa10.93□□□□□ -0.66
LRRFIP1-211ENST00000478958 PAPPA2Q9BXP8 1791 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 UBA6A0AVT1 1052 aaPredicted RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 J3KR12 359 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SLC9A3R1O14745 358 aaPredicted RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 KCNE1P15382 129 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 EVI2BP34910 448 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SLC10A7Q0GE19 358 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SLC36A3Q495N2 470 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 PYCR3Q53H96 274 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 TBPL2Q6SJ96 375 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 ABRAXAS1Q6UWZ7 409 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 TMEM151BQ8IW70 566 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 OR13F1Q8NGS4 319 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 ROPN1LQ96C74 230 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 NRBF2Q96F24 287 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 ASIC4Q96FT7 647 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 CCDC120Q96HB5 630 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 TMEM209Q96SK2 561 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 KCTD14Q9BQ13 255 aaPredicted RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 C17orf62Q9BQA9 187 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 TRIM15Q9C019 465 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 TUBB1Q9H4B7 451 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 ALG2Q9H553 416 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 LTB4R2Q9NPC1 389 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 MAT2BQ9NZL9 334 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 AZIN1O14977 448 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 PDPK1O15530 556 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 UGT2B4P06133 528 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 DNAJB2P25686 324 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 PRDX3P30048 256 aaKnown RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 POLR2IP36954 125 aaKnown RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 GSK3BP49841 420 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 CLCN5P51795 746 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 PPP1R8Q12972 351 aaKnown RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 PAGE3Q5JUK9 113 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 GATAD2AQ86YP4 633 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SEPT8Q92599 483 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 CDCA5Q96FF9 252 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 TSPAN17Q96FV3 270 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SMARCD1Q96GM5 515 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 KCNN2Q9H2S1 579 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 SMPD3Q9NY59 655 aaPredicted RBP10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 COQ3Q9NZJ6 369 aa10.92□□□□□ -0.66
LRRFIP1-211ENST00000478958 DNMT3LQ9UJW3 386 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms