RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TMEM59LQ9UK28 342 aa5.93□□□□□ -1.46
ECHDC1-215ENST00000475319 PSME2Q9UL46 239 aa5.93□□□□□ -1.46
ECHDC1-215ENST00000475319 MYRFQ9Y2G1 1151 aa5.93□□□□□ -1.46
ECHDC1-215ENST00000475319 NR2E1Q9Y466 385 aa5.93□□□□□ -1.46
ECHDC1-215ENST00000475319 NSD3Q9BZ95 1437 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ABCA3Q99758 1704 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 A0A0G2JMP0 313 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 H3BML4 177 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 H3BMQ9 156 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CLDN3O15551 220 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 DHX15O43143 795 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 THAP12O43422 761 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CALUO43852 315 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CST8O60676 142 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PPP1R11O60927 126 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 USP12O75317 370 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PDE9AO76083 593 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 UBXN7O94888 489 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CAMTA2O94983 1202 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 RASAL1O95294 804 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PTBP3O95758 552 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 NDST3O95803 873 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TNNC2P02585 160 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 S100A8P05109 93 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PFKFB1P16118 471 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CKMT2P17540 419 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 BMI1P35226 326 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ADMP35318 185 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 HMGCLP35914 325 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 MAPK9P45984 424 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 DIO1P49895 249 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 GATMP50440 423 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ERFP50548 548 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CLCNKBP51801 687 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CAPZA1P52907 286 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ITGA8P53708 1063 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SLC18A1P54219 525 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TMBIM6P55061 237 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 MANFP55145 182 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ABATP80404 500 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 DSC1Q08554 894 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CDH17Q12864 832 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CAMK1Q14012 370 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ARHGAP19Q14CB8 494 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TRIP10Q15642 601 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TBCCQ15814 346 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 AAK1Q2M2I8 961 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TMEM44Q2T9K0 475 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 KRTCAP3Q53RY4 240 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 AGAP6Q5VW22 663 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SULT1C3Q6IMI6 304 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TYW3Q6IPR3 259 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 RNF111Q6ZNA4 994 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 RTL4Q6ZR62 310 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CREB3L2Q70SY1 520 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CENPUQ71F23 418 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 NLRX1Q86UT6 975 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 KRT73Q86Y46 540 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PRR18Q8N4B5 295 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 OXR1Q8N573 874 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 NECAB1Q8N987 351 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SNX31Q8N9S9 440 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 OR7G3Q8NG95 312 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 OR52H1Q8NGJ2 320 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 POC1BQ8TC44 478 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 BLOC1S5Q8TDH9 187 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 FAM216AQ8WUB2 273 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CPNE4Q96A23 557 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 COA7Q96BR5 231 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SGTBQ96EQ0 304 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 AGAP4Q96P64 663 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CSPG4P5Q96PW8 444 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 FMO2Q99518 471 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PKP4Q99569 1192 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 DCUN1D5Q9BTE7 237 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SLC2A11Q9BYW1 496 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ACPTQ9BZG2 426 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 OR51V1Q9H2C8 321 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 OR51M1Q9H341 326 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PNPLA3Q9NST1 481 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 BLOC1S4Q9NUP1 217 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ADPRHL2Q9NX46 363 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 THUMPD1Q9NXG2 353 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 VPS54Q9P1Q0 977 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ZSWIM5Q9P217 1185 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 NFKBIL1Q9UBC1 381 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SRRDQ9UH36 339 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 EIF2B4Q9UI10 523 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF229Q9UJW7 825 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 SLC22A7Q9Y694 548 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 AP4B1Q9Y6B7 739 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ATP23Q9Y6H3 246 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 MYOM1P52179 1685 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 ALS2Q96Q42 1657 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 CRB1P82279 1406 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 PSME4Q14997 1843 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 TUBGCP6Q96RT7 1819 aa5.92□□□□□ -1.46
ECHDC1-215ENST00000475319 MYH13Q9UKX3 1938 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 NRAPQ86VF7 1730 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms