RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CACNG3O60359 315 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SH3BGRLO75368 114 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 VNN1O95497 513 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 FTH1P19P0C7X4 201 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CD70P32970 193 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 RAB15P59190 212 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 RPS3AP61247 264 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF33BQ06732 778 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM171BQ6P995 826 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 MFSD7Q6UXD7 560 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 Q6ZS52 159 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ASB18Q6ZVZ8 466 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 LMNTD2Q8IXW0 634 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PLA2G15Q8NCC3 412 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR4K2Q8NGD2 314 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 HIC2Q96JB3 615 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAIM2Q9BWQ8 316 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCED1AQ9H1Q7 454 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 MRM3Q9HC36 420 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLRF1Q9NZS2 232 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CAMK2AQ9UQM7 478 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CHMP2BQ9UQN3 213 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 DDX60Q8IY21 1712 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ARID1BQ8NFD5 2236 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM187AA6NFU0 413 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 IDSB3KWA1 339 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 POLR3GO15318 223 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACSL3O95573 720 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ATF6P18850 670 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 TRPC1P48995 793 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CXCR3P49682 368 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 EPHA4P54764 986 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ETF1P62495 437 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 DSC2Q02487 901 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 TAF5Q15542 800 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCDC92Q53HC0 331 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 INO80DQ53TQ3 878 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 AP1ARQ63HQ0 302 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR56A4Q8NGH8 313 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM71BQ8TC56 605 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 UCN3Q969E3 161 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CRB3Q9BUF7 120 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 FGFBP2Q9BYJ0 223 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CARD9Q9H257 536 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNF1Q9H3M0 494 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCND1Q9NSA2 647 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 IARS2Q9NSE4 1012 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 NCF1BA6NI72 391 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 NCF1CA8MVU1 366 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 WASH3PC4AMC7 463 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 POP7O75817 140 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 NCF1P14598 390 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PSMA3P25788 255 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CFHR1Q03591 330 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 TARDBPQ13148 414 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPARCL1Q14515 664 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 GLE1Q53GS7 698 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCID2Q5JVF3 399 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CAPN13Q6MZZ7 669 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 C6orf15Q6UXA7 325 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 POLNQ7Z5Q5 900 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC13A5Q86YT5 568 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR1N1Q8NGS0 311 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ASB15Q8WXK1 588 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 THOC3Q96J01 351 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 MPP4Q96JB8 637 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 EBNA1BP2Q99848 306 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCM2Q9BSQ5 444 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 EML4Q9HC35 981 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 THAP10Q9P2Z0 257 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 UPB1Q9UBR1 384 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CDH22Q9UJ99 828 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF451Q9Y4E5 1061 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 MATN3O15232 486 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRKCGP05129 697 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CEACAM1P13688 526 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CKMT2P17540 419 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NT5EP21589 574 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 RPL10P27635 214 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TUBB3Q13509 450 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 BTBD16Q32M84 506 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TEX44Q53QW1 395 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TCEAL6Q6IPX3 200 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 EPM2AIP1Q7L775 607 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TC2NQ8N9U0 490 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM181AQ8N9Y4 354 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC35F5Q8WV83 523 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TCEAL3Q969E4 200 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MYRFLQ96LU7 910 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR6C1Q96RD1 312 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 AIF1LQ9BQI0 150 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 DDX47Q9H0S4 455 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 RDH14Q9HBH5 336 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PHIPQ8WWQ0 1821 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MATN2O00339 956 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 GNGT2O14610 69 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 KDELR3O43731 214 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 SOCS5O75159 536 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 UMPSP11172 480 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADRA1DP25100 572 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms