RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZCCHC2Q9C0B9 1178 aaKnown RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 C20orf27Q9GZN8 174 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TFB2MQ9H5Q4 396 aaKnown RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 KCTD5Q9NXV2 234 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 CD274Q9NZQ7 290 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 ATXN10Q9UBB4 475 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 EBF1Q9UH73 591 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 FZD4Q9ULV1 537 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 DNAJC16Q9Y2G8 782 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 A0A0G2JND7 137 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 LRRC72A6NJI9 287 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 A8MT66 165 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TARM1B6A8C7 271 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 SNX2O60749 519 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 EDF1O60869 148 aaKnown RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 IPO13O94829 963 aaKnown RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 SUPT7LO94864 414 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 FSBPO95073 299 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 SIX3O95343 332 aaPredicted RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 FTH1P02794 183 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TPBGLP0DKB5 382 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 ZNF8P17098 575 aaPredicted RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 TSPAN8P19075 237 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 AOAHP28039 575 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 CLDN2P57739 230 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 STARD6P59095 220 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TMEM259Q4ZIN3 620 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 RGS9BPQ6ZS82 235 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 GPSM1Q86YR5 675 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 CRLF3Q8IUI8 442 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 VRK3Q8IV63 474 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 CFAP206Q8IYR0 622 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 GJD3Q8N144 294 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 SYNPOQ8N3V7 929 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 PTGR2Q8N8N7 351 aaPredicted RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 DTX3LQ8TDB6 740 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 ASZ1Q8WWH4 475 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 SNX19Q92543 992 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 ESAMQ96AP7 390 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TMEM159Q96B96 161 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TOE1Q96GM8 510 aaKnown RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 NECAB3Q96P71 396 aaPredicted RBP3.65□□□□□ -1.83
RTN4-208ENST00000404909 TMEM237Q96Q45 408 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 C1QTNF7Q9BXJ2 289 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 C1QTNF2Q9BXJ5 285 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 TRIM39Q9HCM9 518 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 PREBQ9HCU5 417 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 CD320Q9NPF0 282 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 THAP1Q9NVV9 213 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 ZNHIT2Q9UHR6 403 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 INVSQ9Y283 1065 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 LRRK1Q38SD2 2015 aa3.65□□□□□ -1.83
RTN4-208ENST00000404909 LRRC14BA6NHZ5 514 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SRRM3A6NNA2 597 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 SYCE1LA8MT33 242 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 F8W8V4 182 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 H0Y8X5 98 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SGTAO43765 313 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 KERAO60938 352 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 AP2A2O94973 939 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SEMA4FO95754 770 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CHRNGP07510 517 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CD9P21926 228 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 GRK2P25098 689 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ARRB2P32121 409 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CDH13P55290 713 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ABCE1P61221 599 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 ABRQ12979 859 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FZD5Q13467 585 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 TGFBIQ15582 683 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CGB2Q6NT52 195 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FOXR1Q6PIV2 292 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ADAMTSL4Q6UY14 1074 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SPATA21Q7Z572 469 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 RAB44Q7Z6P3 723 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 CACNA2D3Q8IZS8 1091 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ZNF687Q8N1G0 1237 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FBXO39Q8N4B4 442 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 DEFB119Q8N690 84 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 RHEBL1Q8TAI7 183 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SEC16BQ96JE7 1060 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ATOH8Q96SQ7 321 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 NELL2Q99435 816 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 EGFL8Q99944 293 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CCM2Q9BSQ5 444 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 GPR174Q9BXC1 333 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ITM2CQ9NQX7 267 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PHPT1Q9NRX4 125 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 TM7SF3Q9NS93 570 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CIDEBQ9UHD4 219 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ADAMTS6Q9UKP5 1117 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FIS1Q9Y3D6 152 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 COL4A2P08572 1712 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ABCA7Q8IZY2 2146 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 KRT87PA6NCN2 255 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PABPN1LA6NDY0 278 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 POM121BA6NF01 834 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 QSOX1O00391 747 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 KLF11O14901 512 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 LATO43561 262 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms