RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 TMED1Q13445 227 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 CRY1Q16526 586 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 GPR107Q5VW38 600 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 LYSMD3Q7Z3D4 306 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 DTWD1Q8N5C7 304 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 OR4F6Q8NGB9 312 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 C17orf80Q9BSJ5 609 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 TSR3Q9UJK0 312 aaKnown RBP16.09■□□□□ 0.17
VPS16-203ENST00000380469 PCDHB1Q9Y5F3 818 aa16.09■□□□□ 0.17
VPS16-203ENST00000380469 A0A1B0GVM2 712 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 LSM1O15116 133 aaKnown RBP16.08■□□□□ 0.17
VPS16-203ENST00000380469 RAD51BO15315 384 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 TSPAN3O60637 253 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 KATNA1O75449 491 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 KCNH1O95259 989 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 GJB5O95377 273 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 COL6A1P12109 1028 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 ATF6P18850 670 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 NFKBIAP25963 317 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 DCKP27707 260 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 HTR6P50406 440 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 HLCSP50747 726 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 ALDH3A2P51648 485 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 TRAF2Q12933 501 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 HECTD3Q5T447 861 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 TMEM214Q6NUQ4 689 aaKnown RBP16.08■□□□□ 0.17
VPS16-203ENST00000380469 FUT10Q6P4F1 479 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 MILR1Q7Z6M3 343 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 RNF217Q8TC41 542 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 PLD4Q96BZ4 506 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 ZBTB18Q99592 522 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 P2RY12Q9H244 342 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 POLR3HQ9Y535 204 aaPredicted RBP16.08■□□□□ 0.17
VPS16-203ENST00000380469 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 PCDHGA11Q9Y5H2 935 aa16.08■□□□□ 0.17
VPS16-203ENST00000380469 OR7A17O14581 309 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 PRMT5O14744 637 aaPredicted RBP16.08■□□□□ 0.16
VPS16-203ENST00000380469 GSTA4O15217 222 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 NOL3O60936 208 aaKnown RBP16.08■□□□□ 0.16
VPS16-203ENST00000380469 CNPP09543 421 aaKnown RBP16.08■□□□□ 0.16
VPS16-203ENST00000380469 DGKQP52824 942 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 ARSFP54793 590 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 CTBSQ01459 385 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 TWF1Q12792 350 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 SELPLGQ14242 412 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 PTPRRQ15256 657 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 C18orf21Q32NC0 220 aaPredicted RBP16.08■□□□□ 0.16
VPS16-203ENST00000380469 RTP2Q5QGT7 225 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 CLEC4FQ8N1N0 589 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 CHCHD4Q8N4Q1 142 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 PDZD8Q8NEN9 1154 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 OR8J3Q8NGG0 315 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 MIPOL1Q8TD10 442 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 THAP11Q96EK4 314 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 PPP3R2Q96LZ3 170 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 HBEGFQ99075 208 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 TUBA1CQ9BQE3 449 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 IPPKQ9H8X2 491 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 NTN4Q9HB63 628 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
VPS16-203ENST00000380469 ZMYM5Q9UJ78 669 aa16.08■□□□□ 0.16
VPS16-203ENST00000380469 H3BMQ9 156 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 TBC1D4O60343 1298 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 SLC2A4P14672 509 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 GGT1P19440 569 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 JAK1P23458 1154 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 EEF1B2P24534 225 aaKnown RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 SGSHP51688 502 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ELAVL2Q12926 359 aaKnown RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 DAG1Q14118 895 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ABRAXAS2Q15018 415 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ZIK1Q3SY52 487 aaPredicted RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 PYCR3Q53H96 274 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 PTRHD1Q6GMV3 140 aaKnown RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 RGMBQ6NW40 437 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 NCEH1Q6PIU2 408 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ANKS3Q6ZW76 656 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 RNF180Q86T96 592 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 TMBIM1Q969X1 311 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 COG8Q96MW5 612 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 DOK1Q99704 481 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 UGT2B28Q9BY64 529 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ING2Q9H160 280 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ACTL8Q9H568 366 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 MARCH5Q9NX47 278 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 EIF3LQ9Y262 564 aaKnown RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 ST14Q9Y5Y6 855 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 FFAR2O15552 330 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ATE1O95260 518 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 MSH3P20585 1137 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 SLC11A1P49279 550 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ACLYP53396 1101 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 PRKCZQ05513 592 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 NEDD8Q15843 81 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms