RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 HTR6P50406 440 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 EMP3P54852 163 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 NR6A1Q15406 480 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 HABP4Q5JVS0 413 aaKnown RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 ADGRF1Q5T601 910 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 OFCC1Q8IZS5 231 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 ZNF420Q8TAQ5 688 aaPredicted RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 C12orf43Q96C57 262 aaKnown RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 CGREF1Q99674 301 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 TTPALQ9BTX7 342 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 HIPK3Q9H422 1215 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 PIF1Q9H611 641 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 EBF1Q9UH73 591 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 ANKRD28O15084 1053 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 ANXA6P08133 673 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 MSH3P20585 1137 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 JAK1P23458 1154 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 TUFMP49411 452 aaKnown RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 AP5B1Q2VPB7 878 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 CXorf57Q6NSI4 855 aaKnown RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 PRSS55Q6UWB4 352 aaPredicted RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 SBSNQ6UWP8 590 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 ZNF783Q6ZMS7 281 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 C16orf59Q7L2K0 433 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 RALGPS2Q86X27 583 aaPredicted RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 TERB1Q8NA31 727 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 OR8J3Q8NGG0 315 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 PNPT1Q8TCS8 783 aaKnown RBP17.92■□□□□ 0.46
TDP2-202ENST00000378198 PPP3R2Q96LZ3 170 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 PPM1MQ96MI6 270 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 ACTL8Q9H568 366 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 ZNF711Q9Y462 761 aa17.92■□□□□ 0.46
TDP2-202ENST00000378198 TMEM88BA6NKF7 163 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 TSPAN3O60637 253 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 DEAF1O75398 565 aaPredicted RBP17.91■□□□□ 0.46
TDP2-202ENST00000378198 GMNNO75496 209 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 ALBP02768 609 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 RAP2AP10114 183 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 HMOX2P30519 316 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 GATMP50440 423 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 PTPRRQ15256 657 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 FAM98BQ52LJ0 330 aaKnown RBP17.91■□□□□ 0.46
TDP2-202ENST00000378198 INO80DQ53TQ3 878 aaPredicted RBP17.91■□□□□ 0.46
TDP2-202ENST00000378198 CCNYL2Q5T2Q4 361 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 GALNT13Q8IUC8 556 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 FAM126BQ8IXS8 530 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 CARNMT1Q8N4J0 409 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 PDPRQ8NCN5 879 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 FBXO22Q8NEZ5 403 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 GPR63Q9BZJ6 419 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 IPPKQ9H8X2 491 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 CXorf21Q9HAI6 301 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 MAGEE1Q9HCI5 957 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 LHX3Q9UBR4 397 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 V9GYQ6 96 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 NT5C1B-RDH14C9J2C7 533 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 FFAR2O15552 330 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 FZD6O60353 706 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 PRSS23O95084 383 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 KCNH1O95259 989 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 MT-ND1P03886 318 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 ELNP15502 786 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 GGT1P19440 569 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 HMGCLP35914 325 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 TWF1Q12792 350 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 SMU1Q2TAY7 513 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 C18orf21Q32NC0 220 aaPredicted RBP17.91■□□□□ 0.46
TDP2-202ENST00000378198 PTRHD1Q6GMV3 140 aaKnown RBP17.91■□□□□ 0.46
TDP2-202ENST00000378198 TBPL2Q6SJ96 375 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 LINGO4Q6UY18 593 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 TAS1R1Q7RTX1 841 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 MILR1Q7Z6M3 343 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 DTWD1Q8N5C7 304 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 ITFG1Q8TB96 612 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 TMEM175Q9BSA9 504 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 OSBPL6Q9BZF3 934 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 GKN1Q9NS71 199 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 CDH7Q9ULB5 785 aa17.91■□□□□ 0.46
TDP2-202ENST00000378198 POLR3HQ9Y535 204 aaPredicted RBP17.91■□□□□ 0.46
TDP2-202ENST00000378198 ZNF106Q9H2Y7 1883 aaKnown RBP17.9■□□□□ 0.46
TDP2-202ENST00000378198 GLUD1P00367 558 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 GALTP07902 379 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 ZNF7P17097 686 aaPredicted RBP17.9■□□□□ 0.46
TDP2-202ENST00000378198 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■■■■□ 22.5
TDP2-202ENST00000378198 ALDH3A2P51648 485 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 MTPNP58546 118 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 CHRNB3Q05901 458 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 PMS2P3Q13401 168 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 SELPLGQ14242 412 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 ABRAXAS2Q15018 415 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 RFTN2Q52LD8 501 aaPredicted RBP17.9■□□□□ 0.46
TDP2-202ENST00000378198 CROCCP3Q8IVE0 287 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 DOK1Q99704 481 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 NTN4Q9HB63 628 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 PREBQ9HCU5 417 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 LRFN2Q9ULH4 789 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 PCDHB9Q9Y5E1 797 aa17.9■□□□□ 0.46
TDP2-202ENST00000378198 A0A0J9YVX5 310 aa17.89■□□□□ 0.45
TDP2-202ENST00000378198 KATNA1O75449 491 aa17.89■□□□□ 0.45
TDP2-202ENST00000378198 CNPP09543 421 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms